Pairwise Alignments

Query, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

Subject, 720 a.a., DNA-dependent ATPase I and helicase II (NCBI) from Escherichia coli BW25113

 Score = 1030 bits (2662), Expect = 0.0
 Identities = 514/723 (71%), Positives = 596/723 (82%), Gaps = 4/723 (0%)

Query: 2   IDPSLLLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAV 61
           +D S LLD LNDKQREAVAAP  NLL+LAGAGSGKTRVLVHRIAWLMSVE  SP+S+MAV
Sbjct: 1   MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60

Query: 62  TFTNKAAAEMRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQ 121
           TFTNKAAAEMR RI +LM  +  GMW GTFHG+ HR+LRAH++DA L +DFQI+DS+DQ 
Sbjct: 61  TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120

Query: 122 RLLKRLIKAHNLDDKQWPARQVAWWINNQKDEGLRPTHINAF-DPVTQTYLKLYTAYQEA 180
           RLLKRLIKA NLD+KQWP RQ  W+IN+QKDEGLRP HI ++ +PV QT+ K+Y AYQEA
Sbjct: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180

Query: 181 CDRAGLVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQ 240
           CDRAGLVDFAE+LLRA EL     HI +HY+ RF +ILVDEFQDTN IQYAW+R++AG  
Sbjct: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240

Query: 241 SNVMIVGDDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANN 300
             VMIVGDDDQSIYGWRGA+VENI++F  +FP   TIRLEQNYRST  IL A+N LI NN
Sbjct: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300

Query: 301 SERMGKQLWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGGTLTDCAILYRNNAQS 360
           + R+GK+LWTDG  GEPIS+Y A+NELDEARFVV++IK WQ+ GG L +CAILYR+NAQS
Sbjct: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360

Query: 361 RVLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGLGD 420
           RVLEEALLQAS+ YRIYGGMRFFERQEIKDALSYLRLI NRNDD AFERV+NTP RG+GD
Sbjct: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420

Query: 421 KTLETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPLHVL 480
           +TL+ +R  +RDR  TLW A   LL ++ L GRAASAL RF+ELI+AL +E  DMPLHV 
Sbjct: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480

Query: 481 TDHAVKTSGLLEMYQQEKGEKSKARIENLEELVTATRQFEKPEEAQEMTMLTAFLTHAAL 540
           TD  +K SGL  MY+QEKGEK + RIENLEELVTATRQF   EE +++  L AFL+HAAL
Sbjct: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540

Query: 541 EAGEGQADEHDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCY 600
           EAGEGQAD   DAVQLMTLHSAKGLEFP VF+VG+EEGMFPSQMS +E GRLEEERRL Y
Sbjct: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600

Query: 601 VGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPEGCLDEVRMKAQVSRPTSTGRFS 660
           VG+TRAMQKL +TYAE RRLYG++ YH+PSRFI ELPE C++EVR++A VSRP S  R  
Sbjct: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG 660

Query: 661 QTVVKESFNETGFNLGSRVRHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYARL 720
             +V+   N++G+ LG RVRH KFGEGTI+N EGSG  SR+QVAF G+GIKWLV AYARL
Sbjct: 661 TPMVE---NDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717

Query: 721 EKV 723
           E V
Sbjct: 718 ESV 720