Pairwise Alignments

Query, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

Subject, 726 a.a., Superfamily I DNA and RNA helicases from Kangiella aquimarina DSM 16071

 Score =  849 bits (2193), Expect = 0.0
 Identities = 422/727 (58%), Positives = 549/727 (75%), Gaps = 7/727 (0%)

Query: 2   IDPSLLLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAV 61
           +D S ++  LND Q+EAV AP + LL+LAGAGSGKTRVLVHRIAWL+ VE  S  S++AV
Sbjct: 1   MDASSIIQPLNDAQKEAVTAPNKALLVLAGAGSGKTRVLVHRIAWLVQVERVSAHSILAV 60

Query: 62  TFTNKAAAEMRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQ 121
           TFTNKAA EM GR+E+++   A GMW GTFH I HR+LRAHY DA L E FQI+D+ DQ 
Sbjct: 61  TFTNKAAKEMLGRVEDMLAMPARGMWIGTFHSIAHRLLRAHYRDAGLPEGFQILDAQDQL 120

Query: 122 RLLKRLIKAHNLDDKQWPARQVAWWINNQKDEGLRPTHINAF-DPVTQTYLKLYTAYQEA 180
           R++KR++K  NLDD +WP +Q  W+IN +KD+GLRP  I+   D    T +K+Y AY+EA
Sbjct: 121 RVIKRVMKELNLDDNEWPPKQAQWFINAKKDDGLRPGDIHHHGDFFVSTMVKVYYAYEEA 180

Query: 181 CDRAGLVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQ 240
           C R GLVDF E+LLRA EL   N H+ +HYQ RF+HILVDEFQDTNAIQYAW+R++    
Sbjct: 181 CKRGGLVDFNELLLRAYELWANNPHLLKHYQDRFQHILVDEFQDTNAIQYAWIRLLCNDN 240

Query: 241 SNVMIVGDDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANN 300
           + + IVGDDDQSIYGWRGAR+ENI++F ++FP     RLEQNYRST TIL+A+N +IANN
Sbjct: 241 NRITIVGDDDQSIYGWRGARIENIQQFEKDFPDCKVSRLEQNYRSTSTILKAANAVIANN 300

Query: 301 SERMGKQLWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGGTLTDCAILYRNNAQS 360
            +RMGK LWT+G  GEPI +YSA+NE +EARF+ ++I+ W +QG +  D AILYR+NAQS
Sbjct: 301 QDRMGKSLWTEGNQGEPIILYSAFNEQEEARFIAARIEDWVQQGNSYDDIAILYRSNAQS 360

Query: 361 RVLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGLGD 420
           R+LE+A+LQ  + YRIYGG+RFFER EIKD L+Y+RL+ NR+DDT+FERV+N P RGLG+
Sbjct: 361 RILEDAMLQKGIPYRIYGGLRFFERAEIKDTLAYMRLMANRDDDTSFERVVNQPARGLGE 420

Query: 421 KTLETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPLHVL 480
           K+++ IR  AR    +LW A+  ++ +Q+L  RA +AL  F+ LIN LE    ++ L   
Sbjct: 421 KSVDMIRMQARQDETSLWQAASKMVVEQLLPPRAKNALGGFLHLINELETSTAELDLWEQ 480

Query: 481 TDHAVKTSGLLEMYQQEKGEKSKARIENLEELVTATRQFEK----PEEAQEMTMLTAFLT 536
           TD  ++ SGLL+MY +EKGEK +AR ENL+ELV ATR+F+     P+E  +MT L AF+ 
Sbjct: 481 TDIVIEHSGLLDMYSKEKGEKGQARKENLQELVNATREFDPDEAIPDETPDMTPLQAFIA 540

Query: 537 HAALEAGEGQADEHDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEER 596
           HA LEAGE QADE+ ++VQ+MTLHSAKGLEFPLVF+ GVEE +FP QMS +E G LEEER
Sbjct: 541 HATLEAGETQADEYQESVQMMTLHSAKGLEFPLVFIAGVEEKLFPHQMSLDEPGGLEEER 600

Query: 597 RLCYVGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPEGCLDEVRMKAQVSRPTST 656
           RL YVG+TRAM++LY+T+AE RR++G++ Y + SRFIRE+P+  L EVR+  +V RP   
Sbjct: 601 RLAYVGITRAMKQLYLTFAEKRRIFGRETYPQQSRFIREIPDELLTEVRLNTRVQRPV-F 659

Query: 657 GRFSQTVVKESFNETGFNLGSRVRHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTA 716
            R  ++ ++    E GF LG  V+HPKFG+G IIN+EG GPQ+ VQ+ F  EG+K L+ A
Sbjct: 660 NRSPKSPIQRKGPE-GFYLGQLVKHPKFGKGIIINYEGEGPQASVQINFEKEGLKKLMLA 718

Query: 717 YARLEKV 723
           YA+LE V
Sbjct: 719 YAKLEPV 725