Pairwise Alignments

Query, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., DNA helicase Rep from Dickeya dianthicola ME23

 Score =  397 bits (1019), Expect = e-114
 Identities = 243/637 (38%), Positives = 362/637 (56%), Gaps = 13/637 (2%)

Query: 11  LNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAVTFTNKAAAE 70
           +N  Q+ AV       L+LAGAGSGKTRV+  +IA L+         + AVTFTNKAA E
Sbjct: 3   MNPSQQHAVEFVTGPCLVLAGAGSGKTRVITQKIAHLIRGCGYQARHIAAVTFTNKAARE 62

Query: 71  MRGRIEELM-HGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQRLLKRLIK 129
           M+ R+ + +      G+   TFH +   I++  Y    +  +F + D  DQ  LLK L +
Sbjct: 63  MKERVAQTLGRKETRGLLIATFHTLGLEIIKREYAALGMKSNFSLFDDQDQLALLKELTE 122

Query: 130 AHNLDDKQWPARQVAWWINNQKDEGLRPTHINAFDPVTQTYL--KLYTAYQEACDRAGLV 187
               +DK    +Q+   ++N K++ + P    A     Q  L    Y  Y E      ++
Sbjct: 123 LWLQNDKDL-LQQLVSALSNWKNDLIDPAQAAALARSEQDRLFAHCYRLYDEHLRACNVL 181

Query: 188 DFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQSNVMIVG 247
           DF +++L    LL+ N+ +RE +Q R +++LVDE+QDTN  QY  ++++ G+++   +VG
Sbjct: 182 DFDDLILLPTLLLKRNEEVRERWQNRLRYLLVDEYQDTNTSQYELIKLLVGSRARFTVVG 241

Query: 248 DDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANNSERMGKQ 307
           DDDQSIY WRGAR +N+    ++FP +  I+LEQNYRS+  IL+A+N LIANN     K+
Sbjct: 242 DDDQSIYSWRGARPQNLSLLQQDFPQLQVIKLEQNYRSSGRILKAANILIANNPHVFEKR 301

Query: 308 LWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGGT-LTDCAILYRNNAQSRVLEEA 366
           L+++   GE + + +A NE  EA  VV ++        T   D AILYR N QSR+ E+ 
Sbjct: 302 LYSELGYGEELKIITANNEDHEAERVVGELIAHHFIRKTQYGDYAILYRGNHQSRLFEKV 361

Query: 367 LLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGLGDKTLETI 426
           L+Q  + YRI GG  FF R EIKD L+YLR++ N  DD+AF RV+NTP R +G  TL+ +
Sbjct: 362 LMQNRIPYRISGGTSFFSRPEIKDLLAYLRVLTNPEDDSAFLRVVNTPKREIGPATLQKL 421

Query: 427 RFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPLHVLTD--HA 484
              A  R  +L++AS  +   Q L+GR   +L RF + +  +       P+  + D  H 
Sbjct: 422 GEWANQRNRSLFNASFDMGLSQTLSGRGLESLQRFTQWMGDIARLAEPEPVKAVRDLIHG 481

Query: 485 VKTSGLLEMYQQEKGEK-SKARIENLEELVTATRQFEKPEEAQEMTMLTAFLTHAALE-- 541
           +     L  Y+     K ++ R++N+  L T   +  +  +  E   LT  +T   L   
Sbjct: 482 LDYESWL--YETSPSPKAAEMRMKNVNTLFTWMTEMLEGSDLDEPMTLTQVVTRFTLRDM 539

Query: 542 AGEGQADEHDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCYV 601
               +A+E  + VQLMTLH++KGLEFP V++VG+EEG+ P Q S +E   ++EERRL YV
Sbjct: 540 MERNEAEEELEQVQLMTLHASKGLEFPYVYLVGMEEGLLPHQTSIDE-DNIDEERRLAYV 598

Query: 602 GMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPE 638
           G+TRA ++L  T    RR YG+    +PSRF+ ELP+
Sbjct: 599 GITRAQKELTFTLCRERRQYGELIRPEPSRFLLELPQ 635