Pairwise Alignments

Query, 279 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 283 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Magnetospirillum magneticum AMB-1

 Score =  248 bits (633), Expect = 1e-70
 Identities = 117/278 (42%), Positives = 173/278 (62%)

Query: 2   LSYRHSFHAGNHADVLKHIVQSLILNSLQQKEKPFVYHDTHSGVGRYDLTHEWSEKTGEY 61
           ++YRH++HAGN ADV+KH + ++++ SL++K+ PF   DTH+G+G YDL    ++KTGEY
Sbjct: 1   MNYRHAYHAGNFADVMKHAILAMVVASLKRKDTPFFALDTHAGIGAYDLEAPQADKTGEY 60

Query: 62  KQGIARIWQQDNIPAELDSYLDAIRQLNQGETLRYYPGSPRVARAHLREQDRMVLTELHP 121
             GIAR+    + PAEL++YL  +R  N    LR YPGSP + R  +R QDRM L ELHP
Sbjct: 61  LSGIARVLDAADPPAELETYLALVRTWNSEGVLRRYPGSPELMRGLMRPQDRMALVELHP 120

Query: 122 SDYPLLEQEFHRDRQVSIYKEDGFARLKASLPPQERRGLVLIDPPYELAKEYRDVVRAIA 181
            D   L   FH DR+V ++  DG+   K  LPP ERRGLVL+DPP+E+  E+  ++ A+ 
Sbjct: 121 EDVETLRARFHGDRRVGVHHLDGYTAAKGLLPPPERRGLVLMDPPFEVKNEFERLLAALR 180

Query: 182 QSYKRWATGIYAIWYPVVNRCDIDDMLEGLQGLEIRKILQIELGVAPDTNERGMTASGMI 241
           ++ K W TGIY  WYP+  R  +D  L+ +      + L  EL + P  +   +  +G++
Sbjct: 181 RARKLWPTGIYLAWYPIKGREPVDQFLQAIADDGGPEALAAELLLRPAKDPFKLNGNGLL 240

Query: 242 VINPPWTLESQMQTILPFLKQAIAPATGHYKVEWVVPE 279
           VINPPW L   +  +LP+L   +AP +G   +  ++ E
Sbjct: 241 VINPPWQLRESLDRVLPWLAAVMAPDSGSAAIRQLIGE 278