Pairwise Alignments

Query, 279 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 280 a.a., predicted DNA (exogenous) processing protein (NCBI) from Escherichia coli BW25113

 Score =  375 bits (962), Expect = e-109
 Identities = 178/280 (63%), Positives = 217/280 (77%), Gaps = 1/280 (0%)

Query: 1   MLSYRHSFHAGNHADVLKHIVQSLILNSLQQKEKPFVYHDTHSGVGRYDLTHEWSEKTGE 60
           MLSYRHSFHAGNHADVLKH VQSLI+ SL++K+KPF+Y DTH+G GRY L  E +E+TGE
Sbjct: 1   MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGE 60

Query: 61  YKQGIARIWQQDNIPAELDSYLDAIRQLNQGETLRYYPGSPRVARAHLREQDRMVLTELH 120
           Y +GIARIWQQD++PAEL++Y++ ++  N+   LRYYPGSP +AR  LREQD + LTELH
Sbjct: 61  YLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARLLLREQDSLQLTELH 120

Query: 121 PSDYPLLEQEFHRDRQVSIYKEDGFARLKASLPPQERRGLVLIDPPYELAKEYRDVVRAI 180
           PSDYPLL  EF +D +  + K DGF +LKA LPP  RRGL+LIDPPYE+  +Y+ VV  I
Sbjct: 121 PSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGI 180

Query: 181 AQSYKRWATGIYAIWYPVVNRCDIDDMLEGLQGLEIRKILQIELGVAPDTNERGMTASGM 240
           A+ YKR+ATGIYA+WYPVV R  I  M+  L+   IRKILQIEL V PD++ RGMTASGM
Sbjct: 181 AEGYKRFATGIYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGM 240

Query: 241 IVINPPWTLESQMQTILPFLKQAIAPA-TGHYKVEWVVPE 279
           IVINPPW LE QM  +LP+L   + PA TGH  V W+VPE
Sbjct: 241 IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE 280