Pairwise Alignments

Query, 279 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 280 a.a., Protein involved in catabolism of external DNA from Enterobacter asburiae PDN3

 Score =  371 bits (953), Expect = e-108
 Identities = 176/280 (62%), Positives = 217/280 (77%), Gaps = 1/280 (0%)

Query: 1   MLSYRHSFHAGNHADVLKHIVQSLILNSLQQKEKPFVYHDTHSGVGRYDLTHEWSEKTGE 60
           MLSYRHSFHAGNHADVLKH VQSLI+ SL++KEKPF+Y DTH+G GRY L+ E +E+TGE
Sbjct: 1   MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKEKPFLYLDTHAGAGRYQLSGEHAERTGE 60

Query: 61  YKQGIARIWQQDNIPAELDSYLDAIRQLNQGETLRYYPGSPRVARAHLREQDRMVLTELH 120
           Y +GIARIWQQD++PAEL+ Y+  +   N+   LRYYPGSP +AR  LREQD + LTELH
Sbjct: 61  YLEGIARIWQQDDLPAELEPYIGVVNHFNRNGQLRYYPGSPLIARQLLREQDSLQLTELH 120

Query: 121 PSDYPLLEQEFHRDRQVSIYKEDGFARLKASLPPQERRGLVLIDPPYELAKEYRDVVRAI 180
           PSD+PLL  EF +D +  + K DG+ +LKA LPP  RRGLVLIDPPYE+  +Y+ VV  I
Sbjct: 121 PSDFPLLRSEFQKDSRARVEKSDGYQQLKAKLPPVSRRGLVLIDPPYEIKTDYQAVVTGI 180

Query: 181 AQSYKRWATGIYAIWYPVVNRCDIDDMLEGLQGLEIRKILQIELGVAPDTNERGMTASGM 240
            + YKR+ATG YA+WYPVV R  I  M++ L+   IRKILQIEL V PD+++RGMTASGM
Sbjct: 181 HEGYKRFATGTYALWYPVVLRAQIKRMIKDLEATGIRKILQIELAVRPDSDQRGMTASGM 240

Query: 241 IVINPPWTLESQMQTILPFLKQAIAPA-TGHYKVEWVVPE 279
           IVINPPW LE+QM  +LP+L + + PA TGH  V W+VPE
Sbjct: 241 IVINPPWKLEAQMNNVLPWLHKKLVPAGTGHATVSWIVPE 280