Pairwise Alignments

Query, 279 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 280 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Dickeya dianthicola ME23

 Score =  372 bits (955), Expect = e-108
 Identities = 176/280 (62%), Positives = 219/280 (78%), Gaps = 1/280 (0%)

Query: 1   MLSYRHSFHAGNHADVLKHIVQSLILNSLQQKEKPFVYHDTHSGVGRYDLTHEWSEKTGE 60
           MLSYRHSFHAGNHADVLKH VQSLI+ +L++K+KP +Y DTHSG GRY L  E +E+TGE
Sbjct: 1   MLSYRHSFHAGNHADVLKHTVQSLIITALKEKDKPLLYLDTHSGAGRYQLQSEHAERTGE 60

Query: 61  YKQGIARIWQQDNIPAELDSYLDAIRQLNQGETLRYYPGSPRVARAHLREQDRMVLTELH 120
           Y  GI RIWQ+D+IPAEL+ Y+  +R  N G+ LRYYPGSP +AR  LREQD + LTELH
Sbjct: 61  YLDGIGRIWQRDDIPAELEPYMQVVRSYNSGDKLRYYPGSPLIARQLLREQDNIHLTELH 120

Query: 121 PSDYPLLEQEFHRDRQVSIYKEDGFARLKASLPPQERRGLVLIDPPYELAKEYRDVVRAI 180
           PSD+PLL QEF RD +  + +EDG+ +LKA LPP  RRGL+LIDPPYEL  +Y+ VV  +
Sbjct: 121 PSDFPLLRQEFLRDDRARVVREDGYQQLKAQLPPPSRRGLILIDPPYELKTDYQAVVTGV 180

Query: 181 AQSYKRWATGIYAIWYPVVNRCDIDDMLEGLQGLEIRKILQIELGVAPDTNERGMTASGM 240
            + Y+R+ATG++A+WYPVV R  I  +L+ L+G  IR+ILQIEL V PD+   GMTASGM
Sbjct: 181 QEGYRRFATGVFALWYPVVLRQHIKRLLKELEGTGIRRILQIELAVLPDSARHGMTASGM 240

Query: 241 IVINPPWTLESQMQTILPFLKQAIAP-ATGHYKVEWVVPE 279
           IVINPPW LESQM+++LP+L  A+ P  TGH +VEWVVPE
Sbjct: 241 IVINPPWKLESQMKSVLPWLHHALVPTGTGHTRVEWVVPE 280