Pairwise Alignments

Query, 279 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  119 bits (297), Expect = 9e-32
 Identities = 85/272 (31%), Positives = 126/272 (46%), Gaps = 4/272 (1%)

Query: 2   LSYRHSFHAGNHADVLKHIVQSLILNSLQQKEKPFVYHDTHSGVGRYDLTHEWSEKTGEY 61
           ++YRHSFHAGN AD++KH +  L L  ++Q   P    DTH+G G YDL+ +   ++ E 
Sbjct: 1   MNYRHSFHAGNFADLVKHAL-VLWLVKVRQAAGPLAVFDTHAGAGLYDLSGD-GARSKEA 58

Query: 62  KQGIARIWQQDNIPAELDSYLDAIRQLNQGETLRYYPGSPRVARAHLREQDRMVLTELHP 121
           + G+AR+   +     +D+    +  LN     R+YPGSP +    L    R V  EL+P
Sbjct: 59  EAGVARLMSAEGRTPLMDALAAEVAALNPEGGSRFYPGSPLLIADALTPGGRYVGFELNP 118

Query: 122 SDYPLLEQEFHRDRQVSIYKEDGFARLKASLPPQERRGLVLIDPPYELAKEYRDVVRAIA 181
               +L +           + DG+A + A    +    LVLIDPP+E   +Y        
Sbjct: 119 PVRAMLAEALAGRANAETREGDGYAAVVAE-AAKTNGPLVLIDPPFEKPDDYVRSAETAI 177

Query: 182 QSYKRWATGIYAIWYPVVNRCDIDDMLEGLQGLEIRKILQIELGVAPDTNERGMTASGMI 241
              KR      AIW P+ +    D  +  LQG      L  E  + P TN   M    M+
Sbjct: 178 AVVKRDPNTTVAIWTPLKDLETFDGFIRRLQG-RAGSTLVAEARLRPLTNPMKMNGCAMV 236

Query: 242 VINPPWTLESQMQTILPFLKQAIAPATGHYKV 273
           V+NPP   E+    I  ++  A+  A G  +V
Sbjct: 237 VVNPPAGAEAAATQICGWVAGALGEAGGRAEV 268