Pairwise Alignments

Query, 279 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 280 a.a., Ribosomal RNA large subunit methyltransferase J from Azospirillum sp. SherDot2

 Score =  264 bits (675), Expect = 1e-75
 Identities = 127/278 (45%), Positives = 180/278 (64%)

Query: 2   LSYRHSFHAGNHADVLKHIVQSLILNSLQQKEKPFVYHDTHSGVGRYDLTHEWSEKTGEY 61
           ++YRH FHAGN ADV+KH V +LIL+ L+ K  PF   DTH+G+GRYDLT E + +T E 
Sbjct: 1   MNYRHIFHAGNPADVMKHAVLALILDHLRAKPAPFCVLDTHAGIGRYDLTSEAARRTAES 60

Query: 62  KQGIARIWQQDNIPAELDSYLDAIRQLNQGETLRYYPGSPRVARAHLREQDRMVLTELHP 121
            +GI R++        L  YLDA++ LN   +LR+YPGSPRVARA LR QDRMVL ELHP
Sbjct: 61  DEGIGRLFGHPLAHPALAPYLDAVQALNPDGSLRWYPGSPRVARAALRPQDRMVLVELHP 120

Query: 122 SDYPLLEQEFHRDRQVSIYKEDGFARLKASLPPQERRGLVLIDPPYELAKEYRDVVRAIA 181
            D   L+ EF  DR V++++ D +  LKA LPP+E+RGLVLIDPP+E   E+  +   +A
Sbjct: 121 DDAHTLKAEFAGDRAVAVHQSDAYTALKAHLPPKEKRGLVLIDPPFEQPDEFARMAEGLA 180

Query: 182 QSYKRWATGIYAIWYPVVNRCDIDDMLEGLQGLEIRKILQIELGVAPDTNERGMTASGMI 241
            +++RW+TGI+A+WYP+  R  +    + ++   I K+L  EL   P+     +  SG++
Sbjct: 181 LAHRRWSTGIFALWYPIKERAAVWRFQDAVEKTGIPKVLIAELTWHPEDTHLRLNGSGLL 240

Query: 242 VINPPWTLESQMQTILPFLKQAIAPATGHYKVEWVVPE 279
           ++NPPW L+  ++ +LP L  A+    G   V W+ PE
Sbjct: 241 IVNPPWQLDEMLKAMLPALHDALPSTGGGTAVSWLTPE 278