Pairwise Alignments

Query, 279 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., Ribosomal RNA large subunit methyltransferase J from Alteromonas macleodii MIT1002

 Score =  201 bits (510), Expect = 2e-56
 Identities = 103/266 (38%), Positives = 156/266 (58%), Gaps = 10/266 (3%)

Query: 1   MLSYRHSFHAGNHADVLKHIVQSLILNSLQQKEKPFVYHDTHSGVGRYDLTHEWSEKTGE 60
           MLSY+H+FHAGNHADV+KH+    ++N+L++K+KPF   DTH+G G YDLT   S K  E
Sbjct: 1   MLSYQHAFHAGNHADVIKHLCWIGVINALKKKDKPFTLFDTHAGAGTYDLTDAMSSKNKE 60

Query: 61  YKQGIARIWQQDNIPAELDSYL-DAIRQLNQGETLRYYPGSPRVARAHLREQDRMVLTEL 119
           Y+ GI+R+   D    +L S L D +         + YPGSP ++    R+ D + L EL
Sbjct: 61  YETGISRLLSDDKCAQDLSSLLADYLSLCEPFFAQQQYPGSPAISAKAKRDGDNLHLMEL 120

Query: 120 HPSDYPLLEQEFH--RDRQVSIYKEDGFARLKASLPPQERRGLVLIDPPYELAKEYRDVV 177
           HP+++  L+      R R   ++K DG+  L+A  PP+  RG +LIDPPYE A EY D+V
Sbjct: 121 HPAEFDKLDSNVSRLRTRNSHVHKRDGYEGLRALTPPKPNRGAILIDPPYERANEYNDLV 180

Query: 178 RAIAQSYKRWATGIYAIWYPVVNR------CDIDDMLEGLQGLEIRKILQIELGVAPDTN 231
           + + Q +KRW      +WYP+++          + M E L  +  +   + E+ V  +T 
Sbjct: 181 KGVEQVFKRWQQAQIVVWYPLLSERAGAKSGASEAMCEKLAAMG-KPCFKAEICVEENTA 239

Query: 232 ERGMTASGMIVINPPWTLESQMQTIL 257
           + GM  SG+ V+NPPW L++ +++ L
Sbjct: 240 DAGMYGSGVFVLNPPWQLDTNLKSAL 265