Pairwise Alignments

Query, 703 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., tyrosine-type recombinase/integrase from Paraburkholderia sabiae LMG 24235

 Score = 70.9 bits (172), Expect = 2e-16
 Identities = 83/372 (22%), Positives = 145/372 (38%), Gaps = 24/372 (6%)

Query: 314 EIQTICFIVCGALTGMRRSELFCLHSNSFKEKEMYGKKYYTLQSEQHKFSQGRGKMAEWV 373
           +++T C+I     +G+R SE+  L  +     +        L      +  G  +  +W+
Sbjct: 281 QLRTACYICIDMFSGLRDSEMMSLEEDCLSSSKSMDGTIDVLWLHGTIYKTGL-RAKKWM 339

Query: 374 TTKFTQKAIELAEAISRYMRIQLLEDDDPMSVHNSSCLWLGQGRKSQKPIIRQDNNMRTH 433
                 +A+ +   ++  +R  L  ++  +     +      G++ ++ +       RT 
Sbjct: 340 VPAVVGEAVAILTRLTSPLRNALYNEEKILLAQAGAITVPASGQRVRRRLDEIQAQKRTL 399

Query: 434 FLKICEKAGALITEDDLDEFRVINPNREPNNADERLKV--GNVWPLTTHQLRRTFAVFSK 491
           FL      G           + IN N +   A   ++   G  +PL++HQ RRT+A F  
Sbjct: 400 FLCKQSSGGVRTLAG-----QTINRNLKEFCASLNIRGVDGQFYPLSSHQFRRTYARFIA 454

Query: 492 RHNLCHDIAIKEQFKHLDLPTTEWYGEGGLASKIKALQIDTELQSFLNDVIQESTTQKIH 551
           +  L   + ++  F H  L  T  Y +G         Q DTEL   L  V  E   ++  
Sbjct: 455 KAELGDLLTLQHHFGHWSLDMTALYADGA----PDEYQADTEL---LEMVTAEKRVRQTE 507

Query: 552 EWYKGCDSGQLMGHMAGSINKNRISLHKKYKSWDAINEHVKAGRLTLVGTLHSYCMA--- 608
                 DS   + + A  +   R ++         I E+  AG +TL GT HS+C+    
Sbjct: 508 VMASYLDSDAPIANGAHWLESWRSTVRTAENKEQLIAEY--AGTITLNGTGHSWCVGNAK 565

Query: 609 GYECQMHKVSSPANCMSCENQLIDKEKAENWDKRYQWVCKQVTDMEAIGSLTSSMYSHFI 668
           G  C    V     C+ C + +I +E    W    + +  Q  +  AIG L  S  +   
Sbjct: 566 GVGCGGLCVFEAQMCVDCNHGIIGQEHRPVW----EGIRDQQLEAMAIGDLGESGKARAQ 621

Query: 669 TQIRAAEKVLHK 680
             +  AEKVL +
Sbjct: 622 QILVKAEKVLQR 633