Pairwise Alignments

Query, 584 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 584 a.a., thiamine biosynthesis protein ThiF from Alteromonas macleodii MIT1002

 Score =  142 bits (359), Expect = 3e-38
 Identities = 142/554 (25%), Positives = 238/554 (42%), Gaps = 46/554 (8%)

Query: 57  NDPHIQLPFAYILQQPEQYKGRLLPHINFGFCLCYVTQMEADWNSNDLKSTYQDVDEQIQ 116
           ++  ++ P   +L++P   +G    HI  G  LC+V +    +++   +    D    I 
Sbjct: 47  DESFLRPPKVTVLRKPH-IEGVRRTHIVEGNTLCFVDENNYYFDAEHPEKAASDTIGFIN 105

Query: 117 LTLDNSVASVESGTSNDVELEGEFSAYWQSEEELYLLAKPSRKAQLKAHLVEAELSSGSI 176
           +T+   V    S T +  +   EF AYW+  +  YL+A  + K  +  +   + LSS   
Sbjct: 106 MTIKRMV----SPTLSHDDFNNEFDAYWRPHQYAYLIAADNAK-YIDRYRRRSPLSSAES 160

Query: 177 RREYVAACSEQSEELVKWLNQRKF--DESSLQE--VSITTHCISVKPNRLAGVNWPPSCL 232
               +     +S     W  +R +  DE    E  V +T     V P       WP +  
Sbjct: 161 EETLIHE-GRESGAFKAWTFKRAYQIDEHEPIENVVQLTIRNPPVPPAADILYKWPIASW 219

Query: 233 REVLSWLK-------------LVDYSAHARTVTLLMAKRTKRHILL-FDVEGQDELAVYL 278
              + W K             L   +  +  +T+L++   K  ++  F V    +  +  
Sbjct: 220 ENFVLWSKAQGNSFVATMLEKLAKVALRSHDITILISYTNKSGLMHHFAVRALFKRNIRT 279

Query: 279 ELNLDVIGKRYFGRNAARKRNINNEAALLGGKFVSANFKRLGVTRADRDTLLSRNQSRPD 338
               D   +    +N   KR + +  ++   + V + F+RLG+  A    ++ RN    D
Sbjct: 280 IAKRDARARESAKKNRQNKRKLADIISMFSAQQVKS-FERLGIFNASPSFVIGRNTLGDD 338

Query: 339 VGNLSQKRIALIGCGTIGGYLAELLLRSGAGCGE-NYFHLYDNDSFKPHNFARHSLTAHN 397
           +  L   +I LIGCGT+GGY+A  L++ GAG GE     L D D  KP N  RH L A+ 
Sbjct: 339 LKGL---KIGLIGCGTLGGYIASTLIKLGAGTGEGGELILSDGDLLKPENLGRHVLDANY 395

Query: 398 FGLAKSIALANSLKEAVHIAQSIK---GIDRQFPIQADVLSKYDIVIDATGRPPVSKRLA 454
            G  KS AL + L+ +VH   + +    ID     +  + S  D+VIDA G  P+SK ++
Sbjct: 396 IGEFKSFALKHFLQNSVHWPFNCELWPSIDAAHCKR--LFSHCDLVIDAVGNIPLSKMMS 453

Query: 455 AVARTLIADIRPVLIHAFNDGNGRASKVLVDDGRC-CYGCMMADP----AVYRNNIDLRF 509
                        LIH + D +G A + L+DD +  C  C+  +      +++N  D   
Sbjct: 454 LQLHRSEPSKDITLIHGWIDADGNAVRCLLDDRKAGCINCLRVEGKERFPIFKNENDANE 513

Query: 510 EGIDLAKEKHISCGSTYTPYDAAVSHITAALAQEAVLNTLEHTLPWNYSEHMLDGSRSK- 568
                 K   +SCG ++TPY A+VS   A+L    +L+ L         ++  +    + 
Sbjct: 514 H-----KPVAMSCGQSFTPYAASVSLAGASLIINTLLDNLHDKNTPRLRQYKANNCVPEL 568

Query: 569 KPRTLKRFSGCNIC 582
           K +T+K  S C +C
Sbjct: 569 KWQTMKGLSTCKVC 582