Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  168 bits (426), Expect = 1e-46
 Identities = 100/275 (36%), Positives = 157/275 (57%), Gaps = 17/275 (6%)

Query: 37  VLFVIVAISAPLIAPTNPYDLSSIDIMDAELPPSWMEGGNEHFLLGTDEQGRDIFSTILY 96
           VL  ++ + A + A   PY+  +ID+     PPS          LGTDE GRD+ S  + 
Sbjct: 13  VLIAVLLVLAVVAAVWTPYNPLAIDLRSKLQPPSMAHW------LGTDEFGRDVASRAMQ 66

Query: 97  GSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMRFADIQLSFSTMMVAIIVSAI 156
           G+  S  +  L V L   +G+V+G+ AG+  G  D  LM F D  L+F  +++A+ V  I
Sbjct: 67  GAATSCLVALLTVTLATAIGLVVGVVAGFVRGWTDRVLMAFNDTLLAFPGLLLALGVMVI 126

Query: 157 FKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLAEKKKEYVEAARVMGFKAPRI 216
             A+  G          +V+ + +A  P   R VR +VL+ +++EYVEA+R++G      
Sbjct: 127 VGANKWG----------IVLALSMAYAPSVVRVVRGTVLSLREREYVEASRMIGNSELYT 176

Query: 217 MFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPVDQPSLGSLISIGFTYIFSGA 276
           M+RHILPNC++P+ V++T      ++SE+ALSFLGLG+P   P+ G++++    Y+ S A
Sbjct: 177 MWRHILPNCVAPVAVLATSMFGWVLLSESALSFLGLGVPPPAPTWGNMLASARPYMAS-A 235

Query: 277 WWITAFPGIVLVLLVLVINLLGDWLRDVFNPKIYK 311
            W+   PG+ + L +L INLLG+ LRD  +P+  K
Sbjct: 236 VWLCVVPGLCIALTLLGINLLGESLRDRLDPRTEK 270