Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  218 bits (555), Expect = 1e-61
 Identities = 114/292 (39%), Positives = 179/292 (61%), Gaps = 14/292 (4%)

Query: 18  DFLYYFLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELPPSWMEGGNE 77
           +F   F  ++ A+      +L ++VA+ AP IAP  P + +S   +    PP+W +GG+ 
Sbjct: 22  EFWAAFSANRGAVIGLVTIILLMLVAMFAPWIAPHAPNETNSAVFLQ---PPAWQQGGST 78

Query: 78  HFLLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMRF 137
            +LLGTD  GRDI S ++YG+RLSL+IG   V L + +G+V+GL AG+F G ++  +MR 
Sbjct: 79  SYLLGTDAIGRDILSRLMYGARLSLSIGVAVVALSVVVGVVLGLIAGFFRGVLEIAIMRL 138

Query: 138 ADIQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLAE 197
            DI L+  ++++AI++ AI     G    +    V +VV+      P Y R  RA+V+AE
Sbjct: 139 MDIVLTLPSLLLAIVIVAI----LGPGLVNAMLAVAIVVL------PHYVRITRAAVIAE 188

Query: 198 KKKEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPVD 257
             ++YV AARV G    R+MFR +LPNC +P++V +++ ++ AI+  AAL FLGLG    
Sbjct: 189 VSRDYVTAARVSGAGTLRLMFREVLPNCAAPLIVQASLGISTAILDAAALGFLGLGAQPP 248

Query: 258 QPSLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPKI 309
            P  G++++    ++   AWW+  FPG+ +++ VL  NLLGD LRD  +PK+
Sbjct: 249 SPEWGTMLADAREFVLR-AWWVVTFPGLAILMAVLAFNLLGDGLRDALDPKL 299