Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., ABC transporter permease from Variovorax sp. OAS795

 Score =  310 bits (795), Expect = 2e-89
 Identities = 148/297 (49%), Positives = 212/297 (71%), Gaps = 1/297 (0%)

Query: 13  RFKQSDFLYYFLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELPPSWM 72
           R+  SD  Y F    VAM +  + +  +  A  A  ++P NP+DL+++++ DA LPP+W 
Sbjct: 7   RWLDSDVGYSFRNSPVAMGAALIALACLFCAAFAGWVSPHNPFDLATLELGDARLPPAWS 66

Query: 73  EGGNEHFLLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDS 132
             G+  +LLGTD+QGRDI S ++YG+R+SL +G ++V L +T+G+V+GL AG+ GG +DS
Sbjct: 67  AEGSSKYLLGTDDQGRDILSAVIYGARISLIVGIVSVLLSITVGVVLGLLAGFLGGWLDS 126

Query: 133 FLMRFADIQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRA 192
           FLMR  D+ LSF  ++VA++++ + +A F     S  A  +L++ I +  W QYARTVR 
Sbjct: 127 FLMRLCDVMLSFPPILVALLIAGVGRALFPNAHES-LAFGVLIISISLTGWVQYARTVRG 185

Query: 193 SVLAEKKKEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGL 252
           S L E+ KEYV+AARV G    RIM RH+LPN + P++V++T+QVA AI++EA LSFLG+
Sbjct: 186 STLVERNKEYVQAARVTGVAPLRIMLRHVLPNVMGPVMVLATIQVATAIITEATLSFLGV 245

Query: 253 GLPVDQPSLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPKI 309
           G+P   PSLG+LISIG  Y+FSG WWIT FPG++LVL+ L +NLLGDWLRD  NP++
Sbjct: 246 GVPPTSPSLGTLISIGNQYLFSGEWWITVFPGLMLVLIALSVNLLGDWLRDALNPRL 302