Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., ABC transporter permease from Serratia liquefaciens MT49

 Score =  184 bits (467), Expect = 2e-51
 Identities = 97/286 (33%), Positives = 171/286 (59%), Gaps = 13/286 (4%)

Query: 25  RDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELPPSWMEGGNEHFLLGTD 84
           R ++AM S  + VL  ++ +  P+++P       +++I  A     W         LGTD
Sbjct: 38  RHRLAMISLLLLVLMAVLCLFGPMLSPWQDDAGDALNINQAPGAQHW---------LGTD 88

Query: 85  EQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMRFADIQLSF 144
             GRDI++ +L   R+SLTIG +++ L +TLG ++G  +GY GG +D  +MRFAD+ ++ 
Sbjct: 89  FLGRDIYTRLLLAGRISLTIGLVSMLLSVTLGYLLGALSGYLGGVVDKLIMRFADLLMTI 148

Query: 145 STMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLAEKKKEYVE 204
            ++ + II+ A+       +    Y + M+++++ +  WP  AR VR  +L+ ++++++ 
Sbjct: 149 PSLPLLIIMGAMLSEL---DVSPDYRIYMVMIMLSLLGWPSLARLVRGQILSLRERDFML 205

Query: 205 AARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPVDQPSLGSL 264
           A  V+G    R +F H+LPN +  ++V++T+ VANAI+SE+ALS+LGLG+    PS G++
Sbjct: 206 ATEVLGLSTRRRIFGHLLPNTIPILVVVATMGVANAILSESALSYLGLGVVPPMPSWGNM 265

Query: 265 ISIGFTYI-FSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPKI 309
           +    + I F    W+   PG+ + + V+ IN+LGD LRD  +PK+
Sbjct: 266 MDAANSLIDFQRRPWLWMPPGLAIFITVVAINILGDGLRDALDPKM 311