Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  230 bits (587), Expect = 3e-65
 Identities = 122/293 (41%), Positives = 182/293 (62%), Gaps = 16/293 (5%)

Query: 18  DFLYYFLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAEL-PPSWMEGGN 76
           +F +YF R+K A+   A  ++ +++A+ A  IAP NP +       DA L PP W EGG+
Sbjct: 21  EFWHYFKRNKGAVVGLAYVLIVILIAVFANFIAPYNPAE----QFRDALLAPPVWQEGGS 76

Query: 77  EHFLLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMR 136
              +LGTD+ GRD+ S ++YG+RLSL +G L V L L +GI++GL AGYFGG +D+ +MR
Sbjct: 77  WAHILGTDDVGRDVLSRLMYGARLSLLVGCLVVVLSLVMGIILGLVAGYFGGLVDNIIMR 136

Query: 137 FADIQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLA 196
             DI L+  ++++A+++ AIF  S G    +   V +          P Y R  RA+VL 
Sbjct: 137 VVDIMLALPSLLLALVLVAIFGPSIGNAALALTFVAL----------PHYVRLTRAAVLV 186

Query: 197 EKKKEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPV 256
           E  ++YV A+RV G  A R MF +I PNCL+P++V +++  +NAI+  AAL FLG+G   
Sbjct: 187 EVNRDYVTASRVAGAGAMRQMFVNIFPNCLAPLIVQASLGFSNAILDMAALGFLGMGAQP 246

Query: 257 DQPSLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPKI 309
             P  G+++S    +  S AWW+  FPG+ ++L VL  NL+GD LRD  +PK+
Sbjct: 247 PTPEWGTMLSDVLQFAQS-AWWVVTFPGLAILLTVLAFNLMGDGLRDALDPKL 298