Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., dipeptide transporter (NCBI) from Escherichia coli BW25113

 Score =  229 bits (585), Expect = 5e-65
 Identities = 123/293 (41%), Positives = 181/293 (61%), Gaps = 16/293 (5%)

Query: 18  DFLYYFLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAEL-PPSWMEGGN 76
           +F +YF R+K A+      V+ + +AI A  IAP NP +       DA L PP+W EGG+
Sbjct: 21  EFWHYFKRNKGAVVGLVYVVIVLFIAIFANWIAPYNPAE----QFRDALLAPPAWQEGGS 76

Query: 77  EHFLLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMR 136
              LLGTD+ GRD+ S ++YG+RLSL +G L V L L +G+++GL AGYFGG +D+ +MR
Sbjct: 77  MAHLLGTDDVGRDVLSRLMYGARLSLLVGCLVVVLSLIMGVILGLIAGYFGGLVDNIIMR 136

Query: 137 FADIQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLA 196
             DI L+  ++++A+++ AIF  S G    +   V +          P Y R  RA+VL 
Sbjct: 137 VVDIMLALPSLLLALVLVAIFGPSIGNAALALTFVAL----------PHYVRLTRAAVLV 186

Query: 197 EKKKEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPV 256
           E  ++YV A+RV G  A R MF +I PNCL+P++V +++  +NAI+  AAL FLG+G   
Sbjct: 187 EVNRDYVTASRVAGAGAMRQMFINIFPNCLAPLIVQASLGFSNAILDMAALGFLGMGAQP 246

Query: 257 DQPSLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPKI 309
             P  G+++S    +  S AWW+  FPG+ ++L VL  NL+GD LRD  +PK+
Sbjct: 247 PTPEWGTMLSDVLQFAQS-AWWVVTFPGLAILLTVLAFNLMGDGLRDALDPKL 298