Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  181 bits (459), Expect = 2e-50
 Identities = 106/277 (38%), Positives = 158/277 (57%), Gaps = 19/277 (6%)

Query: 31  SSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELPPSWMEGGNEHFLLGTDEQGRDI 90
           + F++FVLF+ V   A L A  +PYD   + +    LPP        H+  GTDE GRD 
Sbjct: 18  AQFSLFVLFIFVV--AALCAGLSPYDPDRMSLGARTLPPD-----AAHWF-GTDEYGRDY 69

Query: 91  FSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMRFADIQLSFSTMMVA 150
           F+  LYG ++SL +GFLA+     +G V+G  +GYFGG +D+ +MR  DI ++     + 
Sbjct: 70  FTRALYGGQISLMVGFLAMLFSTLIGTVVGTVSGYFGGWLDNLMMRAVDILMAIPAFFLL 129

Query: 151 IIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLAEKKKEYVEAARVMG 210
           ++V+A  K            V  +++II +  W   +R VRA  L+ K++EYV  AR  G
Sbjct: 130 LVVNAYLKPG----------VDNIILIISLLTWMNMSRLVRAETLSVKEREYVLYARASG 179

Query: 211 FKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPVDQPSLGSLISIGFT 270
               RI+ RHI+P  L  I+V +T+ +A+AI+ E+ LSFLGLG+     S GS+++   +
Sbjct: 180 EHPLRIIARHIIPGVLPTIIVAATLNIASAILMESTLSFLGLGVQAPAASWGSMLNNAQS 239

Query: 271 YIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNP 307
           YI   A W+  FPGI+++L V   N+LGD  R  F P
Sbjct: 240 YI-GEASWLAMFPGILILLTVFSFNVLGDVFRTAFEP 275