Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  195 bits (496), Expect = 9e-55
 Identities = 112/286 (39%), Positives = 174/286 (60%), Gaps = 20/286 (6%)

Query: 23  FLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELPPSWMEGGNEHFLLG 82
           FLR+   M+  A+ +L V++A++A  + P +P D+ +         P    G +  F LG
Sbjct: 18  FLRNPSGMTGVALLLLVVVMALAASWVYPGDPLDMVA--------QPFLWPGQDPAFPLG 69

Query: 83  TDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMRFADIQL 142
           TD  GRD+ + +++G+++SL IGF AV + L +G+ +G SAG+FGG++D  L+   ++  
Sbjct: 70  TDSLGRDVAAGVVHGAQVSLQIGFSAVAVSLLIGMTVGASAGFFGGKVDRLLVHVTELFQ 129

Query: 143 SFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLAEKKKEY 202
           +F T ++ +++ AI           Q +V ++   IGVA WP  AR VRA     ++ ++
Sbjct: 130 TFPTFLLVVVLVAI----------GQPSVTLISCAIGVASWPTIARLVRAEFRTWRESDF 179

Query: 203 VEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPVDQPSLG 262
           V AAR  GF + RIM + ILPN L  I+V ++V VA++I+ E+ALSFLG G P ++ S G
Sbjct: 180 VLAARSQGFSSLRIMAQEILPNALPSIIVTTSVMVASSILIESALSFLGFGDP-NRVSWG 238

Query: 263 SLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPK 308
           S+I  G   + S AW++TA PG  LVL VL +NL+GD L D  NP+
Sbjct: 239 SMIGAGRESLRS-AWFLTAIPGGALVLTVLALNLVGDALNDALNPR 283