Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  193 bits (491), Expect = 4e-54
 Identities = 103/265 (38%), Positives = 171/265 (64%), Gaps = 14/265 (5%)

Query: 40  VIVAISAPLIAPTNPYDLSSIDIMDAELPPSWMEGGNEHFLLGTDEQGRDIFSTILYGSR 99
           V++A+ APLI+P +PY   + D+    +PP W + G+   LLGTD+ GRD  S +L+G+R
Sbjct: 51  VLLALLAPLISPHDPY---AQDVSRRLIPPVWHDKGSWAHLLGTDKLGRDYLSRLLFGAR 107

Query: 100 LSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMRFADIQLSFSTMMVAIIVSAIFKA 159
           +SL IG ++V L  T+GI +G+ AGYFGGR+D+ +     ++L+   ++VA+ ++++   
Sbjct: 108 VSLAIGLVSVMLAGTIGIALGVLAGYFGGRVDAVVSYLLTVRLALPVILVALALASL--- 164

Query: 160 SFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLAEKKKEYVEAARVMGFKAPRIMFR 219
             GG      +V ++++++G+  W ++    R+     ++ E++ AA+ +G  +  IM R
Sbjct: 165 -VGG------SVKVVIMLLGLLLWDRFLIVSRSVTRQLREAEFIAAAQTLGASSLFIMLR 217

Query: 220 HILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPVDQPSLGSLISIGFTYIFSGAWWI 279
            ILPN L P+ V++T+++A+A++ EA LSFLGLG+    PS G +++ G  Y+F    W+
Sbjct: 218 EILPNLLGPLTVVATLEIAHAVLLEATLSFLGLGVQPPMPSWGLMVAEGKAYMFFQP-WV 276

Query: 280 TAFPGIVLVLLVLVINLLGDWLRDV 304
              PG+VL LLVL INL+GD LRDV
Sbjct: 277 IVIPGVVLALLVLSINLVGDGLRDV 301