Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., ABC transporter permease subunit from Dickeya dadantii 3937

 Score =  201 bits (511), Expect = 2e-56
 Identities = 111/296 (37%), Positives = 173/296 (58%), Gaps = 27/296 (9%)

Query: 18  DFLYYFLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELPPSWMEGGN- 76
           DFL+ F+R+ +A++S    +L V++A+ AP +AP +P +            P WM  G  
Sbjct: 26  DFLHAFIRNPMALASGGFVLLLVLIAVFAPWLAPWSPME------------PDWMALGAA 73

Query: 77  ---EHFLLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSF 133
              +H++ GTD+ GRD+ S I+YG+R+SL IG ++V L +  GI +GL AGY+G  ID  
Sbjct: 74  PSADHWM-GTDDLGRDVMSRIIYGARISLYIGIVSVSLGMLAGIALGLLAGYYGRSIDML 132

Query: 134 LMRFADIQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRAS 193
           +MR  D+  +F  M++AI V AI                 +++ + V   P +AR VRAS
Sbjct: 133 IMRGCDVLFAFPGMLLAIAVVAILGPGLNN----------VIIAVAVFSVPVFARIVRAS 182

Query: 194 VLAEKKKEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLG 253
            L+ K+  YVEA R  G     I+ RHILP  LS ++V  T+++  +I++ A LSF+GLG
Sbjct: 183 TLSLKQAAYVEAVRCAGAPDRVILLRHILPGTLSNVIVYFTMRIGTSILTAAGLSFIGLG 242

Query: 254 LPVDQPSLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPKI 309
              D P  G+++++  + + +G W ++ FPG+ +   VL  NLLGD LRD  +PK+
Sbjct: 243 PEPDVPEWGNILAMSRSMMMAGQWHVSVFPGLAIFCTVLAFNLLGDALRDTLDPKL 298