Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., ABC transporter permease from Dickeya dadantii 3937

 Score =  181 bits (459), Expect = 2e-50
 Identities = 107/298 (35%), Positives = 168/298 (56%), Gaps = 26/298 (8%)

Query: 10  RWERFKQSDFLYYFLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELPP 69
           RW++ +Q        R++ A  + AV ++F   ++ A L    +P+D +++ I    LPP
Sbjct: 4   RWQQARQQ-----LRRNRPAQLALAVLMVFGATSVLAWL----SPWDPNAMAIQARMLPP 54

Query: 70  SWMEGGNEHFLLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGR 129
                   H+  GTDE GRD F+  LYG ++SL +G LA+     +G ++G  +GY GGR
Sbjct: 55  D-----GAHWF-GTDEYGRDYFTRALYGGQISLMVGVLAMVFSTLIGTLVGTVSGYIGGR 108

Query: 130 IDSFLMRFADIQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYART 189
           +D+ LMR  D+ +S     + ++++A  K            V  +++II    W   +R 
Sbjct: 109 LDTVLMRAVDMLMSIPAFFLLLVLNAYLKPG----------VANIILIISALTWMSLSRL 158

Query: 190 VRASVLAEKKKEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSF 249
           VRA  L+ K++EYV  AR  G +A RI+ RHI+PN L  I+V +T+ +A+AI+ E+ LSF
Sbjct: 159 VRAETLSLKEREYVLYARASGERAWRIILRHIIPNILPTIMVAATLNIASAILMESTLSF 218

Query: 250 LGLGLPVDQPSLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNP 307
           LGLG+     S GS+++    YI   A W+  FPG++++L VL  N+LGD  R  F P
Sbjct: 219 LGLGVQQPNASWGSMLNNAQAYI-GDATWLALFPGVLILLTVLSFNVLGDVFRTAFEP 275