Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., ABC transporter permease from Dickeya dadantii 3937

 Score =  269 bits (688), Expect = 5e-77
 Identities = 138/307 (44%), Positives = 198/307 (64%), Gaps = 15/307 (4%)

Query: 2   SAVSIAPSRWERFKQSDFLYYFLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSID 61
           SA   A S W R      L   L D++A        L V +A+ AP IA  NPYDL+ + 
Sbjct: 12  SAAPAARSAWVRT-----LSMLLHDRLARLGLFTLALIVGLALLAPWIALQNPYDLTQLM 66

Query: 62  IMDAELPPSWMEGGNEHFLLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGL 121
           IMD  LPP     G   + LG+D+QGRD+ S ILYG+R SL +G  +    L +G+ +G+
Sbjct: 67  IMDNRLPPGSAGMGGLTYWLGSDDQGRDLLSAILYGTRTSLLVGVSSALAALVIGMTVGM 126

Query: 122 SAGYFGGRIDSFLMRFADIQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVA 181
            + + GGR D+ LMR  DIQLSF  +++A+I+ ++              V  +++ + + 
Sbjct: 127 LSAWLGGRTDALLMRIVDIQLSFPPILIALILLSVLGQG----------VDKIILALVIT 176

Query: 182 EWPQYARTVRASVLAEKKKEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAI 241
           +W  YART+RAS L E ++ YV+AAR M F APRI+FRH+LPNCL P++V++T+++A AI
Sbjct: 177 QWAYYARTIRASALLESRRNYVDAARGMAFSAPRILFRHMLPNCLPPLIVVATMRIAYAI 236

Query: 242 MSEAALSFLGLGLPVDQPSLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWL 301
           M EA LSFLG+GLP+ +PSLG LI+ GF Y+ SG +WI+ FPG++L+LL++ INL+GD L
Sbjct: 237 MLEATLSFLGIGLPITEPSLGLLIANGFDYLLSGDYWISLFPGVMLLLLIVAINLIGDAL 296

Query: 302 RDVFNPK 308
           RD  N +
Sbjct: 297 RDALNTR 303