Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., ABC transporter permease from Dickeya dadantii 3937

 Score =  194 bits (494), Expect = 2e-54
 Identities = 105/297 (35%), Positives = 181/297 (60%), Gaps = 19/297 (6%)

Query: 8   PSRWERFKQSDFLYYFLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAEL 67
           P  W R+++    ++ +          +    +++A+ AP I+P +PY   + ++    +
Sbjct: 24  PGPWRRWRRKVLGHHGMT-----LGLVILGTIILLAVLAPFISPHDPY---AQEVSRRLI 75

Query: 68  PPSWMEGGNEHFLLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFG 127
           PP W + G+   LLGTD+ GRD FS +L+G+R+SLTIG ++V L  T+GI +G+ AGYFG
Sbjct: 76  PPVWHDKGSWEHLLGTDKLGRDYFSRLLFGARVSLTIGLVSVMLAGTIGISLGVLAGYFG 135

Query: 128 GRIDSFLMRFADIQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYA 187
           GR+D+ +     ++LS   ++VA+ ++++     GG      +V ++++++G+  W ++ 
Sbjct: 136 GRVDAAVSYLLTVRLSMPVILVALALASL----VGG------SVKVVIMLLGLLLWDRFL 185

Query: 188 RTVRASVLAEKKKEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAAL 247
              R      ++ E++ AA+ +G  +  IM R ILPN L P+ V++T+++A+A++ EA L
Sbjct: 186 IVSRTVTRQLREAEFIAAAQTLGASSLFIMLREILPNLLGPLTVVATLEIAHAVLLEATL 245

Query: 248 SFLGLGLPVDQPSLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDV 304
           SFLGLG+    PS G +++ G  Y+F    W+   PG+VL L+VL INL+GD LRDV
Sbjct: 246 SFLGLGVQPPMPSWGLMVAEGKAYMFFQP-WVIVIPGVVLALMVLSINLVGDGLRDV 301