Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., Dipeptide transport system permease protein DppC from Azospirillum sp. SherDot2

 Score =  218 bits (554), Expect = 2e-61
 Identities = 121/294 (41%), Positives = 181/294 (61%), Gaps = 16/294 (5%)

Query: 17  SDFLYYFLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAEL-PPSWMEGG 75
           ++F Y+F ++K A+    V  L  ++AI A +IAP NP     I   DA L PP W EGG
Sbjct: 27  TEFWYHFKQNKGALGGLVVIALIALIAIFAGVIAPHNP----DIQYRDAILTPPVWQEGG 82

Query: 76  NEHFLLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLM 135
           +  ++LGTD+ GRD+ S ++YG+RLS+ IG + V L L +G+ +GL AG+FGG  D  +M
Sbjct: 83  SWSYILGTDDIGRDMMSRLMYGARLSMMIGLIVVTLSLAVGLGLGLVAGFFGGMADVLIM 142

Query: 136 RFADIQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVL 195
           R  DI L+  ++++A++V+AI     G    +    V +VVI      P YAR  RA+VL
Sbjct: 143 RAMDILLALPSLLLAVVVAAI----LGPGLVNAMLAVSVVVI------PHYARLTRAAVL 192

Query: 196 AEKKKEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLP 255
           AE  K+YV A+RV G    R+M   +LPNC++P++V +T+  + AI+  AAL FLGLG  
Sbjct: 193 AEVNKDYVVASRVAGAGPLRLMLIVVLPNCVAPLIVQATLGFSTAILDAAALGFLGLGAQ 252

Query: 256 VDQPSLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPKI 309
              P  G++++    ++   A W+  +PGI +++ VL  NLLGD LRD  +PK+
Sbjct: 253 PPTPEWGTMLASSLQFL-QRAPWVVTWPGIAILVTVLAFNLLGDGLRDALDPKL 305