Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  224 bits (570), Expect = 3e-63
 Identities = 117/294 (39%), Positives = 185/294 (62%), Gaps = 16/294 (5%)

Query: 17  SDFLYYFLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAEL-PPSWMEGG 75
           +DF +YF +++ A+   AVF+L V++A+ A +IAP +P         DA L PP W +GG
Sbjct: 23  ADFWFYFRQNRGAVIGLAVFILLVLIAVFAAVIAPHDPTQ----QYRDALLVPPVWQDGG 78

Query: 76  NEHFLLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLM 135
              FLLGTD  GRD+ S ++YG++ SL IG + V + L  GIVIGL AG+FGG +D+ +M
Sbjct: 79  RAAFLLGTDAVGRDMLSRLIYGAQYSLFIGVVVVSIALVGGIVIGLVAGFFGGWVDTVIM 138

Query: 136 RFADIQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVL 195
           R  D+ L+F ++++A+++ AI              +   ++ I +   P +AR  RA+V+
Sbjct: 139 RVMDVILAFPSLLLALVLVAILGP----------GLTNAMIAIAIVYQPHFARLTRAAVM 188

Query: 196 AEKKKEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLP 255
           +E ++EYV AARV G    R+MF+ ILPNCL+P++V +T+  ++A++  AAL FLG+G  
Sbjct: 189 SELRREYVTAARVAGAGNLRLMFKTILPNCLAPLIVQATLSFSSAVLDAAALGFLGMGAQ 248

Query: 256 VDQPSLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPKI 309
                 G++++    +I   AWW+   PG+ +++ VL INL+GD LRD  +PK+
Sbjct: 249 PPASEWGTMLAEAREFILR-AWWVVTLPGLTILISVLAINLMGDGLRDALDPKL 301