Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  183 bits (464), Expect = 5e-51
 Identities = 103/291 (35%), Positives = 163/291 (56%), Gaps = 20/291 (6%)

Query: 18  DFLYYFLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELPPSWMEGGNE 77
           + + + L+   +    AV +L VI AI AP +A  +PY     + + A         GN 
Sbjct: 20  NIILFLLKSPTSAFGLAVLLLLVIAAIFAPWLATHDPYAQDLANTLQAP--------GNG 71

Query: 78  HFLLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMRF 137
           H + GTDE GRDI+S +L+G+R++LTI  L   +   +G+++G ++GY GG+ D+ +MR 
Sbjct: 72  H-VFGTDELGRDIYSRLLWGARITLTIISLVSIIVGPVGLLVGTASGYLGGKFDTVMMRI 130

Query: 138 ADIQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLAE 197
            DI LSF ++    I+S  F A+ G    +       ++ I +  WP  AR  RA  +  
Sbjct: 131 TDIFLSFPSL----ILSLAFVAALGPSLNNA------IIAIALTSWPPIARLARAEAMTF 180

Query: 198 KKKEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPVD 257
           +K +Y+ AAR+ G    RI+ + I+P CL  +L+  T+ +A  I++ A L FLGLG    
Sbjct: 181 RKADYIAAARLQGASPLRIIVKSIMPMCLPSVLIRLTLNMATVILTAAGLGFLGLGAQPP 240

Query: 258 QPSLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPK 308
            P  G++I+ G  Y+   +WW+  FPG+ ++ + L  NLLGD LRD  +PK
Sbjct: 241 LPEWGAMIATGRRYMLD-SWWLVTFPGVAILSVSLAFNLLGDGLRDALDPK 290