Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  188 bits (478), Expect = 1e-52
 Identities = 111/291 (38%), Positives = 172/291 (59%), Gaps = 21/291 (7%)

Query: 19  FLYYFLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELPPSWMEGGNEH 78
           F+   L+ +   +   V ++FV++A+ AP+IAP +P   S + I++   PPS      E 
Sbjct: 18  FIRRLLKRRTVAAGLIVLLVFVLLAVFAPMIAPYSP---SKLSIVNRLKPPS------EL 68

Query: 79  FLLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMRFA 138
           +  GTDE GRD+FS  +Y  RLSL +G   V L   +GI +GL AG+F  ++D+ + R  
Sbjct: 69  YWFGTDEFGRDVFSRTIYAGRLSLLVGAAVVALSSIIGITLGLLAGFFQ-KLDTPIARLI 127

Query: 139 DIQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLAEK 198
           D  ++F  +++AI + A    S          +  +++ + V   P+ AR VRAS L  +
Sbjct: 128 DAMMAFPDILLAIALVAALGPS----------LTTVIIALAVVYSPRLARIVRASTLVIR 177

Query: 199 KKEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPVDQ 258
           +  YVEAAR +G     IM RH+L N +SPILV  T   A+A+++EA LSFLGLG+  + 
Sbjct: 178 ELPYVEAARALGISTFHIMTRHVLRNLVSPILVQCTFLFASAMLAEAGLSFLGLGVSPEI 237

Query: 259 PSLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPKI 309
           P+ G++IS G  YI   A W+T FPG  ++L VL + ++GD LRD+ +P++
Sbjct: 238 PTWGTMISAGRQYI-GQADWMTYFPGFAIILSVLSLQMVGDGLRDMLDPRL 287