Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., Oligopeptide transport permease protein OppB-like @ Glutathione ABC transporter, permease protein GsiC from Variovorax sp. SCN45

 Score =  199 bits (505), Expect = 9e-56
 Identities = 104/319 (32%), Positives = 177/319 (55%), Gaps = 17/319 (5%)

Query: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNL-GDPLRELVGQSVSEAERQALRDELGLNDP 59
           M ++ +KRL   +  + +++++ F     L GDP R   GQ   E     +R ELGL+ P
Sbjct: 1   MLNYFLKRLLGLIPTLLIVAVLVFLFVHMLPGDPARLAAGQEADEQTVAMVRAELGLDKP 60

Query: 60  FIIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYS 119
              ++  F T  +QGD GTS   +RP    I ++   T+ L   + +  ++F + +G+ S
Sbjct: 61  LPQQFVNFFTHMLQGDFGTSIRTRRPVSVEIGERFFPTVMLTITSMVWAVIFGMGIGIVS 120

Query: 120 AIHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESGF 179
           A++      ++ M  +  GIS P F   ++LM +FS++LGWLP      TV    W    
Sbjct: 121 AVYRNKWPDRLGMTLAVSGISFPAFALGMLLMQIFSVQLGWLP------TVGASSW---- 170

Query: 180 FTLDGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHAL 239
                 +H +LPSI L + +  +  R  R+  +EV+  ++++ A+AKG+  + + ++H L
Sbjct: 171 ------KHYILPSITLGAAVAAVMARFTRASFVEVIQEDFVRTARAKGVRESSVVFKHTL 224

Query: 240 KNTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLI 299
           +N ++PV+T+ G+Q G ++  +IL E VF WPG G L ++A+   D P+I   V+   L 
Sbjct: 225 RNALIPVVTMMGLQFGFLLGGSILVEAVFNWPGLGRLLVDAVQMRDYPVIQTLVLLFSLE 284

Query: 300 FVVTNTIVDLLYGLINPTV 318
           F++ N +VD+LYG INPT+
Sbjct: 285 FILINLVVDVLYGYINPTI 303