Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., ABC transporter permease subunit from Variovorax sp. OAS795

 Score =  207 bits (527), Expect = 3e-58
 Identities = 117/332 (35%), Positives = 183/332 (55%), Gaps = 14/332 (4%)

Query: 1   MFSFLVKRLYQALIVMFVISLVAF-AIQDNLGDPLRELVGQ-SVSEAERQALRDELGLND 58
           M  FL+ R+   +     ++L+AF  I+   GDP+  + G+  +  A    LR   G + 
Sbjct: 1   MLRFLLTRVSLLVPTFIGMTLLAFFLIRMVPGDPIETMAGERGIDPARHAQLRTAYGFDK 60

Query: 59  PFIIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVY 118
           P I++Y  ++   + GDLG S   +            AT+EL   A L  ++  +P G+ 
Sbjct: 61  PVIVQYGIYIGRVLHGDLGKSLITQESVANEFLALFPATVELGVCAILFALLLGLPAGII 120

Query: 119 SAIHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESG 178
           +A+   S+F   VMA S  G S+P+F   ++L+  FS++LGW P  GR      +   +G
Sbjct: 121 AAVRRNSIFDHGVMATSLTGYSMPIFWWGLLLILFFSVQLGWTPVSGRIAVQYFVEPRTG 180

Query: 179 FFTLDGLR------------HLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAK 226
           F  +D LR            HLVLP+I L ++ L +  R+ RS MLEVL  +YI+ A+AK
Sbjct: 181 FLLVDALRAGEVDAFWSALHHLVLPAIVLGTVPLAVIARMTRSAMLEVLGEDYIRTARAK 240

Query: 227 GLPLNKIYYQHALKNTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDT 286
           GL   ++   HAL+N ++PV+TV G+Q+G +    ILTET+F WPG G   +EAI R D 
Sbjct: 241 GLSRLRVVGLHALRNALIPVVTVIGLQVGVLFTGAILTETIFSWPGVGKWLIEAIGRRDY 300

Query: 287 PLITAYVIFVGLIFVVTNTIVDLLYGLINPTV 318
           P++   ++ +G I ++ N +VD+ YG+INP +
Sbjct: 301 PVLQGGMLLLGGIVMLVNLLVDVTYGIINPRI 332