Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., ABC transporter permease subunit from Paraburkholderia sabiae LMG 24235

 Score =  220 bits (560), Expect = 4e-62
 Identities = 121/336 (36%), Positives = 194/336 (57%), Gaps = 15/336 (4%)

Query: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNL-GDPLRELVGQ-SVSEAERQALRDELGLND 58
           MF F+++R+   +     I+++AFA+   + GDP+  ++G+  V  A   A    LGL++
Sbjct: 1   MFRFVLRRIGMVIPTFIGITILAFALIHLIPGDPIEVMMGERGVDPAMHAAAMHRLGLDE 60

Query: 59  PFIIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVY 118
           P  I+Y  +V  A+QG+LGTS       ++    +  AT+EL   A L  ++  +P GV+
Sbjct: 61  PLPIQYLHYVGHALQGNLGTSIITNTSVMDEFLARFPATVELSICAMLFALIVGLPAGVF 120

Query: 119 SAIHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESG 178
           +A+   S+    VM  +  G S+P+F   ++L+  FS +LGW P  GR      +   +G
Sbjct: 121 AALRRGSVVDHGVMGTALTGYSMPIFWWGLILIMFFSSKLGWTPVSGRIAVEYDIPHVTG 180

Query: 179 FFTLDGL-------------RHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQA 225
           F  +D L              HL+LPSI L +I L +  R+ RS MLEVL  +YI+ A+A
Sbjct: 181 FLLIDSLLPGTDEGSFRSALSHLILPSIVLGTIPLAVVARMTRSSMLEVLREDYIRTARA 240

Query: 226 KGLPLNKIYYQHALKNTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVD 285
           KGL   ++   HAL+N ++PV+TV G+Q+GT++A  +LTET+F WPG G   ++AI R D
Sbjct: 241 KGLSPGRVIVVHALRNALIPVVTVIGLQVGTLLAGAVLTETLFSWPGIGKWLIDAIGRRD 300

Query: 286 TPLITAYVIFVGLIFVVTNTIVDLLYGLINPTVNLT 321
            P++   ++ +  + +V N +VDLLYG++NP +  T
Sbjct: 301 YPVVQGGILMIATLVIVVNLVVDLLYGVLNPRIRHT 336