Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  294 bits (752), Expect = 2e-84
 Identities = 141/324 (43%), Positives = 218/324 (67%)

Query: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNLGDPLRELVGQSVSEAERQALRDELGLNDPF 60
           MF+F+++RL QA+IVM  ++ +AF +   +GDP+  L+GQ  +  + + LR ELGL+ PF
Sbjct: 1   MFAFILRRLAQAVIVMVSVAFIAFMLFQYVGDPVVFLLGQDATPDQVRELRSELGLDRPF 60

Query: 61  IIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYSA 120
            +++  F+  AVQG+ G S         +I ++  ATLEL   A ++ +V  IP+GVY+A
Sbjct: 61  FVQFWHFLANAVQGEFGLSLRQGAKVSRLIAERFPATLELSMVAAVLALVVGIPMGVYAA 120

Query: 121 IHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESGFF 180
           +   +  +++ M  S +G+S+P FL  I+L+ +F++ LGW PS+GRG+   L  W +G  
Sbjct: 121 LRRGTFMSQVFMTVSLLGVSLPTFLIGILLILLFAVTLGWFPSFGRGDVTQLGWWSTGLL 180

Query: 181 TLDGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHALK 240
           T  G  H+ LP+I LA   L L +RLVR+EMLEVL ++YIKFA+A+GL    +++ HALK
Sbjct: 181 TPKGWHHITLPAITLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLTNRAVHFGHALK 240

Query: 241 NTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLIF 300
           NT++PV+T+ G+Q+G ++A+ I+TETVFQWPG G LF++A+   D P++ AY+  + LIF
Sbjct: 241 NTLVPVMTITGLQLGGLIAFAIITETVFQWPGMGLLFIQAVTFADIPVMAAYLCLIALIF 300

Query: 301 VVTNTIVDLLYGLINPTVNLTGKG 324
           VV N IVDLLY  ++P + +   G
Sbjct: 301 VVINLIVDLLYFAVDPRLRVEKAG 324