Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  177 bits (450), Expect = 2e-49
 Identities = 107/317 (33%), Positives = 173/317 (54%), Gaps = 9/317 (2%)

Query: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNL-GDPLRELVGQSVSEAERQALRDELGLNDP 59
           M   + KRL  A+  + ++S++ F +Q  L GDPL  + G+    A    LR EL L+ P
Sbjct: 1   MLELICKRLLLAVPTLLLVSMMVFGLQKLLPGDPLIAMAGEERDPAVIAQLRAELNLDAP 60

Query: 60  FIIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYS 119
             ++Y  ++T A+QGDLG S     P  ++I  KL  TLEL   A +I +VF I +G+ +
Sbjct: 61  IPVQYFHWLTRALQGDLGVSLRTHEPVTQLIASKLPVTLELSLLAMIIALVFGISMGILA 120

Query: 120 AIHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESGF 179
           A++  S         +  GISIP F   I+L+ VFS+ L WLP+ G              
Sbjct: 121 AVNKNSWVDHGANFVAISGISIPHFWLGILLILVFSVNLQWLPASGYVPFSE-------- 172

Query: 180 FTLDGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHAL 239
             +  LR L+LP+  L + +    +R  R+ M+ VL ++YI+ A+AKGL    +  +HA 
Sbjct: 173 DPIQNLRTLLLPASVLGTGLAATLMRHTRASMIAVLKADYIRTARAKGLLPKAVILKHAF 232

Query: 240 KNTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLI 299
           +N ++PV+T+  +  G ++   +LTE VF  PG G + ++++   D  ++   V+ V + 
Sbjct: 233 RNALVPVITLTTLLFGELLGGAVLTEQVFTIPGFGKMIVDSVFNRDYAVVQGVVLIVAIG 292

Query: 300 FVVTNTIVDLLYGLINP 316
           F++ N + D+LY LINP
Sbjct: 293 FLMLNLLADVLYVLINP 309