Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., ABC transporter permease subunit from Dickeya dadantii 3937

 Score =  177 bits (449), Expect = 3e-49
 Identities = 101/321 (31%), Positives = 173/321 (53%), Gaps = 17/321 (5%)

Query: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNL-GDPLRELVGQSVSEAERQALRDELGLNDP 59
           MF+++V+RL + + V+ VISL+ F     L GDP R   G        +A R+ LGLNDP
Sbjct: 1   MFAYIVRRLLEMIPVLLVISLLVFGFIKLLPGDPARIYAGPDAPIEAVEAARERLGLNDP 60

Query: 60  FIIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYS 119
              +Y  ++   V GDLG +Y  ++P L VI    + TL L        ++  + +GV++
Sbjct: 61  LPQQYLNWLDGLVHGDLGITYRTQQPVLTVIQKSFMPTLWLALAGFAWSVLLGLLIGVFA 120

Query: 120 AIHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESGF 179
           A+         +M+ +  GIS+P F   ++L+   ++  G     G  +  ++       
Sbjct: 121 ALKRGKWQDWSLMSLAVGGISMPPFWLGLLLIQFVAMPFGIFSVSGYNKPADI------- 173

Query: 180 FTLDGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHAL 239
                    +LP++ L + +  +  R  RS  LEV+  +Y++ A+AKGL    I ++H +
Sbjct: 174 ---------ILPALTLGASVAAVMARFTRSAFLEVMQEDYVRTARAKGLRQRLIVWKHVM 224

Query: 240 KNTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLI 299
           +N ++PV+T+ G+Q G ++  +I+ E+VF WPG G+L +E+I   D P+I A V+     
Sbjct: 225 RNALIPVITMLGLQFGFLLGGSIVVESVFNWPGLGWLLIESIKTQDQPVIQALVMLFVFE 284

Query: 300 FVVTNTIVDLLYGLINPTVNL 320
           F++ N +VDLLY ++NP + L
Sbjct: 285 FILINLLVDLLYAVVNPAIRL 305