Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., ABC transporter permease from Dickeya dadantii 3937

 Score =  194 bits (494), Expect = 2e-54
 Identities = 109/319 (34%), Positives = 179/319 (56%), Gaps = 7/319 (2%)

Query: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNL-GDPLRELVGQSVSEAERQALRDELGLNDP 59
           M   + +RL Q L ++F ISLV+F +     GDP++  +   +S+ + + +R  LGL+ P
Sbjct: 1   MDKIVARRLVQLLPMLFFISLVSFLLVKLAPGDPVQAYITPRMSQDDIERVRHSLGLDRP 60

Query: 60  FIIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYS 119
             ++Y  ++    +GDLG S    RP L +I ++L ATL L+  + L+ +  ++PLG+ +
Sbjct: 61  LAMQYLLWLKNVARGDLGYSLISHRPVLTLIVERLPATLGLMGASLLLAVAIAMPLGLLA 120

Query: 120 AIHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESGF 179
                     ++   + IGIS+P+F   I+L+ +FS++L WLPS G         W    
Sbjct: 121 GAFRHRWLDHLLNLVAYIGISVPIFWFGILLIIIFSVQLNWLPSMGMRTVGAADSW---- 176

Query: 180 FTLDGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHAL 239
             LD +RH VLP +AL    L  ++R +RS  +  LS++Y++   A G     I ++H L
Sbjct: 177 --LDVVRHGVLPCVALTFYNLSHYVRYIRSHTITQLSADYVQTQLAYGATRAHILFRHVL 234

Query: 240 KNTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLI 299
           KN MLPV+T+ G+    +V    +TE+VF WPG G L L++I  +D PLI A V+    +
Sbjct: 235 KNVMLPVITLFGLSFSELVVGAYVTESVFSWPGMGLLGLQSITSLDYPLIMAMVMLSACM 294

Query: 300 FVVTNTIVDLLYGLINPTV 318
            V+ N + D+LY + +P +
Sbjct: 295 LVIGNLLADVLYRVADPRI 313