Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., ABC transporter permease from Dickeya dadantii 3937

 Score =  270 bits (689), Expect = 5e-77
 Identities = 133/324 (41%), Positives = 214/324 (66%), Gaps = 1/324 (0%)

Query: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNLGDPLRELVGQSVSEAERQALRDELGLNDPF 60
           M  FL  R  Q LI + V+S++ FA    +G+P+  L+G + + AER+A+    GL+   
Sbjct: 1   MARFLFSRFLQTLITLAVMSVLVFAGVYLVGNPVDLLLGSNATPAEREAVIRAFGLDKTL 60

Query: 61  IIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYSA 120
             +Y  F+T A+QGDLG S+ F +PAL +I  ++ ATLEL   A L+ ++  IPLGV++ 
Sbjct: 61  WQQYLLFLTHALQGDLGNSFIFNQPALHLILQRMPATLELALAAFLLSLLIGIPLGVFAG 120

Query: 121 IHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESGFF 180
           + P SL  K VM  S +G S+P F   +M++ +FS++LGWLPS GRG+TV + G      
Sbjct: 121 LRPDSLAAKSVMTVSILGFSLPTFWIGMMMIMLFSVKLGWLPSSGRGDTVTVAGVPLSLL 180

Query: 181 TLDGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHALK 240
           T DG +HL+LP++ LA   + L IRL R+ + E L  +Y++FA+AKGL   +I + H LK
Sbjct: 181 TADGWQHLLLPALNLALFKISLIIRLTRAGVRECLQQDYVRFARAKGLSERRILFVHVLK 240

Query: 241 NTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLIF 300
           NT++P++TV G+++G ++A+ ++TET++ WPG G L +++I  +D P+I AY++   ++F
Sbjct: 241 NTLIPLITVIGLELGALIAFAVVTETIYAWPGMGKLIIDSIAVLDRPVILAYLMMTVVMF 300

Query: 301 VVTNTIVDLLYGLINPTVNLTGKG 324
            + N +VD+LY +++P + L G+G
Sbjct: 301 SLINLLVDVLYAVVDPRIRL-GEG 323