Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

 Score =  268 bits (686), Expect = 1e-76
 Identities = 128/313 (40%), Positives = 206/313 (65%)

Query: 11  QALIVMFVISLVAFAIQDNLGDPLRELVGQSVSEAERQALRDELGLNDPFIIKYSRFVTA 70
           QA++V   ++L+ F     +G P+  L+    +  +R  L  +LGL+ P   ++  F+  
Sbjct: 2   QAILVALAMALIVFVGLHLIGSPIETLLPPEATYDDRLRLIADLGLDRPLYEQFFLFLKG 61

Query: 71  AVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYSAIHPKSLFTKI 130
            +QG+LG SY +K PA+E+I  +L ATLEL F A L+ ++  +PLG+ +   P+S   +I
Sbjct: 62  LLQGNLGVSYVYKEPAVELILSRLPATLELAFAAVLLSLIVGVPLGLAAGWKPESPLARI 121

Query: 131 VMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESGFFTLDGLRHLVL 190
           +M GS  G S+P+F  A++L+ +FS++LGWLPS GRG T  L G    F TLDGLRH++L
Sbjct: 122 IMIGSIFGFSLPIFWIAVLLIMIFSVQLGWLPSSGRGATEILFGIPWSFVTLDGLRHMLL 181

Query: 191 PSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHALKNTMLPVLTVG 250
           P+I+L+   + +  RL  + + E +SSEY++FA+AKGL   +I   H LKN M+PV+TV 
Sbjct: 182 PAISLSLFNISMVTRLTEAGVREAMSSEYVRFARAKGLSPKRILSVHVLKNVMIPVVTVV 241

Query: 251 GVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLIFVVTNTIVDLL 310
           G+ IG  +A++++TET+F WPG G + +++I  +D P+I AY++ V ++FV+ N +VD+ 
Sbjct: 242 GLDIGQTIAFSVVTETIFAWPGVGKIIIDSIAALDRPVIVAYLMLVVVMFVIINLVVDVT 301

Query: 311 YGLINPTVNLTGK 323
           Y L++P + L G+
Sbjct: 302 YRLLDPRIRLQGE 314