Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  211 bits (537), Expect = 2e-59
 Identities = 123/332 (37%), Positives = 187/332 (56%), Gaps = 14/332 (4%)

Query: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNL-GDPLRELVGQSVSEAERQA-LRDELGLND 58
           M  F+  +L   +     I++VAFA    L GDP+  + G+     ER A L ++LG   
Sbjct: 1   MIRFIFGKLLYLVPTFLGITIVAFAFVRVLPGDPVLLMAGERGISPERHAQLAEQLGFAQ 60

Query: 59  PFIIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVY 118
           P   +Y  F+   +QGDLG S   K+P L        AT+EL   A +I  V  +P+GV 
Sbjct: 61  PIWEQYLHFLGRLLQGDLGNSLVTKKPVLTEFLALFPATVELGLVAIIIATVIGVPVGVI 120

Query: 119 SAIHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESG 178
           +AI   S F +I M  + +G S+P+F   ++L+ +FS  L W P  GR   +      +G
Sbjct: 121 AAIRRGSWFDQISMTTALVGFSMPIFWWGLLLIIMFSGILQWTPVSGRISLMYFFPSVTG 180

Query: 179 FFTLDGL------------RHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAK 226
           F  +D L             HL+LPS+ LA+I L +  R  RS MLEVL  +Y++ A+AK
Sbjct: 181 FMLIDSLISGQKGAFASALSHLILPSVVLATIPLAVIARQTRSAMLEVLGEDYVRTARAK 240

Query: 227 GLPLNKIYYQHALKNTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDT 286
           G+  +++   HAL+N M+PV+T  G+QIG ++A  ILTET+F WPG G   +++I+R D 
Sbjct: 241 GMSASRVVGIHALRNAMIPVITTIGLQIGVLMAGAILTETIFSWPGIGKWMIDSISRRDY 300

Query: 287 PLITAYVIFVGLIFVVTNTIVDLLYGLINPTV 318
           P++ + ++ +  + +V N +VDL YGLINP +
Sbjct: 301 PVVQSGLLLIAGLVMVVNLLVDLTYGLINPRI 332