Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  175 bits (444), Expect = 1e-48
 Identities = 97/307 (31%), Positives = 166/307 (54%), Gaps = 9/307 (2%)

Query: 13  LIVMFVISLVAFAI-QDNLGDPLRELVGQSVSEAERQALRDELGLNDPFIIKYSRFVTAA 71
           ++VMF++  + F I +   GDP   ++G   +  +   LR  LGL+    ++Y  ++   
Sbjct: 2   IVVMFLVVTIVFVILRVTPGDPAAVMLGPDATAQDIAELRTRLGLDQSLGVQYVYYIGQL 61

Query: 72  VQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYSAIHPKSLFTKIV 131
           ++GDLG S F   P    + D+   T  L   + LI  V ++P+G+Y+A    S   +  
Sbjct: 62  LKGDLGQSIFLNMPVGSALLDRAEPTFFLTIFSLLIAGVIALPIGIYAAYRRGSFVDQAA 121

Query: 132 MAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESGFFTLDGLRHLVLP 191
              + +  SIP F   ++LM  F++ L   P  G G          G   L+ + HL LP
Sbjct: 122 TTIAMLAASIPSFWLGLILMQFFAVRLDLFPVSGYGGP--------GASFLERMYHLTLP 173

Query: 192 SIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHALKNTMLPVLTVGG 251
           +IAL  +   L +R  R+ ML+VL  +Y++ A+AKG+   ++  +HALKN ++P+LTV G
Sbjct: 174 AIALGLVSSALILRFTRASMLDVLGDDYVRTARAKGVKERRVVMKHALKNALIPILTVLG 233

Query: 252 VQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLIFVVTNTIVDLLY 311
           +    +++  ++TETVF  PG G L + A+ R D P+I   ++ +  ++V+ N  +D+LY
Sbjct: 234 LTAAVLISGAVVTETVFGLPGVGNLVVSAVLRRDYPVIQGALLVIAGLYVLINFAIDMLY 293

Query: 312 GLINPTV 318
            L++P V
Sbjct: 294 LLVDPRV 300