Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 547 a.a., Oligopeptide-binding protein AppA from Xanthobacter sp. DMC5

 Score =  138 bits (347), Expect = 6e-37
 Identities = 148/522 (28%), Positives = 230/522 (44%), Gaps = 80/522 (15%)

Query: 12  LIAAGLSFGAMAADITVAYDA------------------DPVSMDPHEQLSGGTLQLSHM 53
           L+AA    GA AA    A DA                  +P ++      +G T ++S  
Sbjct: 23  LLAAACVLGAAAAAPVWAADAQSTPQPVRGGVLRFLVEHEPSTLVSIAHTAGPTQRVSPK 82

Query: 54  VFDPLIRFTQKMEFEPRLAESWQ-RVDNETMRFTLRKGVKFHSGNDFTADDVVWTFNRLK 112
           V + L+ +      +P LA  W    D  T  F LR+GVK+H G DFTADDV ++   LK
Sbjct: 83  VTEGLLAYDLDFNPKPALATEWSVSPDGLTYTFKLREGVKWHDGRDFTADDVAYSIQLLK 142

Query: 113 ES-ADFKGIFEPLVSLTKVDDYTIEIKTAGTYP-LIENVATYIFPMDSK-FYTGT-TADG 168
           E     +  F  + ++   D +T  I+ +   P L+  +     P+ +K  Y GT     
Sbjct: 143 EGHPRGRATFASVTAVETPDPHTAIIRLSKPAPYLLTALDANESPIVAKHIYAGTDPLTN 202

Query: 169 KNKAEIVKHGNSFASENISGTGPFTVTAREQGVKLEFQRNPNYWDKASKGNVDKLTLAVI 228
           KN A  +            GTGPF      +G  +  +RNP+YWD A K  +D++ +  I
Sbjct: 203 KNGAAPI------------GTGPFLFKEWVRGSHIILERNPDYWD-ADKPYLDRVVVRFI 249

Query: 229 KEDATRVAALLSGGVDMIA--PVSPNDYQRIKDAKGVDLFTMPGTRVITFQMNQN----- 281
            + + R AA  +G +D+    PV  +D  R++    +      G+    ++ N N     
Sbjct: 250 ADQSARAAAFETGELDLAGGPPVPRSDLARVQALPNL------GSETRGYEYNGNMTQLY 303

Query: 282 ---SNPALKDVRVRQAIVYAINNEGIVDKVMKGAATTAAQQSPVG---YAGYNENLKP-R 334
                P LKD RVR AI  A++   ++D V  G  T A   SPVG       + ++KP  
Sbjct: 304 FNFDTPQLKDKRVRLAIAQALDLNKLLDVVYFGYGTIA--PSPVGPDLKKFVDPSIKPYP 361

Query: 335 FDLNKAKELMKEAGYEKGFNLTMIA------PNNRYVNDEKIAQAASAMLSKIGIKVDLK 388
           FDL  A  L+ EAGY +  + T  A      P N   + + + QA    L+K+GI VD +
Sbjct: 362 FDLKAANRLLDEAGYPRKADGTRFALRLYANPFNGRESGDFVKQA----LAKVGIPVDFQ 417

Query: 389 ------TMPKAQYWPEFDKCAADMLMIGWHPDTEDSANFTEFLTMTRDSNTGKGQYNCGY 442
                  + KA    EFD      L +    +T D     + +  +++   G    N  +
Sbjct: 418 FFDFSTYIQKAYTGREFD------LTLESLSNTFDPTPGIQRIFWSKNFKIGLPFSNASH 471

Query: 443 YSNAEVDKLVNAANEETDLEKRSTMLKKVEEILYNEAAFVPL 484
           Y N +VD L+ A   E+D EKR  +    ++ ++++ A V L
Sbjct: 472 YDNPQVDALLEAGAVESDPEKRRQIWFAFQKAIHDDVAAVHL 513