Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., ABC transporter substrate-binding protein from Variovorax sp. OAS795

 Score =  153 bits (387), Expect = 1e-41
 Identities = 135/498 (27%), Positives = 211/498 (42%), Gaps = 41/498 (8%)

Query: 11  ALIAAGLSFGAMAADITV-AYDADPVSMDPHEQLSGGTLQLSHMVFDPLIRFTQK-MEFE 68
           AL    L+ GA AA   V   +  P +  P    +G +  ++  V++ ++ F +   +  
Sbjct: 22  ALAVLALASGAAAAKTLVYCSEGSPENFYPGVNTTGTSFDVTTQVYNTIVEFERGGTKVV 81

Query: 69  PRLAESWQ-RVDNETMRFTLRKGVKFHSGN-------DFTADDVVWTFNRLKESAD--FK 118
           P LAE W    D     F LRKGVK+HS +       DF ADD ++   R  + +D  FK
Sbjct: 82  PGLAEKWDISADGTQYTFHLRKGVKWHSTSKTFKPTRDFNADDFIFMLERQWKESDPFFK 141

Query: 119 ------------GIFEPLVSLTKVDDYTIEIK-TAGTYPLIENVATYIFPMDSKFYTGTT 165
                       G+ + L S+ +VD++T+ I       P + N+A     + SK Y    
Sbjct: 142 VTSQNHSYFNDMGMPKLLKSVDRVDEFTVRIVLNQAEAPFLANLAMQYAGIQSKEYAIAM 201

Query: 166 ADGKNKAEIVKHGNSFASENISGTGPFTVTAREQGVKLEFQRNPNYWDKASKGNVDKLTL 225
                  ++         ++  GTGPF +   ++   + F+  P YW    K  +D L  
Sbjct: 202 LKAGTPEKV--------DQDPIGTGPFYLVQYQKDAVIRFKAFPQYW--GGKAKIDDLVF 251

Query: 226 AVIKEDATRVAALLSGGVDMIAPVSPNDYQRIKDAKGVDLFTMPGTRVITFQMNQNSNPA 285
           A+  + + R A L  G   ++   +P D   I+    V +   PG  V     N    P 
Sbjct: 252 AITPDASVRWAKLQKGECHVMPYPNPADLDAIRKDPNVQVLEQPGLNVGYLSYNTTKKP- 310

Query: 286 LKDVRVRQAIVYAINNEGIVDKVMKGAATTAAQQSPVGYAGYNENLKP-RFDLNKAKELM 344
             DVRVR+AI  AIN + I+D V       A    P     YN+ +K   +D   AK+L+
Sbjct: 311 FDDVRVRKAINMAINKKAIIDGVYLSTGVAAKNPIPPTMWSYNDAVKDDAYDPEAAKKLL 370

Query: 345 KEAGYEKGFNLTMIA-PNNRYVND--EKIAQAASAMLSKIGIKVDLKTMPKAQYWPEFDK 401
            +AG+  GF+  + A P  R  N   ++IA+   A L+KI +K ++K+    +Y      
Sbjct: 371 AQAGFPDGFSTDLWAMPVQRPYNPNAKRIAELMQADLAKINVKAEIKSFEWGEYRKRLQA 430

Query: 402 CAADMLMIGWHPDTEDSANFTEFLTMTRDSNTGKGQYNCGYYSNAEVDKLVNAANEETDL 461
               M M+GW  D  D  NF   L     + +  G  N   +     + LV  A   T  
Sbjct: 431 GEHQMGMLGWTGDNGDPDNFLYTLLGCASAKSASGS-NISKFCYQPYEDLVLKAKSTTKQ 489

Query: 462 EKRSTMLKKVEEILYNEA 479
             R  + KK + I   +A
Sbjct: 490 ADRDALYKKAQVIFKEQA 507