Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., ABC transporter substrate-binding protein from Erwinia tracheiphila SCR3

 Score =  179 bits (455), Expect = 2e-49
 Identities = 146/506 (28%), Positives = 239/506 (47%), Gaps = 42/506 (8%)

Query: 2   KTMKNKLALALIAAGLSFGAMAADITVAYDADPVSMDPHEQLSGGTLQLSHM-VFDPLIR 60
           KT   K+ L+LIA  +S G  A  +    +  P   +P    SG T   S + +++ L+ 
Sbjct: 7   KTGMLKVGLSLIALTVSAGVQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSVPIYNRLVE 66

Query: 61  F-TQKMEFEPRLAESWQ-RVDNETMRFTLRKGVK------FHSGNDFTADDVVWTFNRLK 112
           F T   E +P LAE W    D +T  F LR+GVK      F  G DF ADDVV++F R  
Sbjct: 67  FKTGTTELQPGLAEKWDISADGKTYTFHLREGVKWQTTKDFKPGRDFNADDVVFSFERQL 126

Query: 113 ESAD------------FKGIFEPLV--SLTKVDDYTIEIKTAGTYPLIENVATYIFPMDS 158
           +  +            F+G+  P +   + KVDD+T+       + L  + A ++  +  
Sbjct: 127 DKNNKYHSLSGGSYEYFEGMDMPKIIEKVEKVDDHTVR------FVLTRSEAPFLADLGM 180

Query: 159 KFYTGTTADGKNKAEIVKHGNSFASE-NISGTGPFTVTAREQGVKLEFQRNPNYWDKASK 217
            F +  +A+  +   ++K G     + N  GTGPF +   ++  ++ ++    YW   +K
Sbjct: 181 DFASILSAEYADN--MLKAGTPEKLDLNPVGTGPFQLMQYQKDSRILYKAFDQYW--GNK 236

Query: 218 GNVDKLTLAVIKEDATRVAALLSGGVDMIAPVSPNDYQRIKDAKGVDLFTMPGTRVITFQ 277
             +D+L  +V  + + R A L  G   +I   +P D  R+K+ K ++L  +PG  V    
Sbjct: 237 PKIDRLVFSVTPDASVRYAKLQKGECQVIPFPNPADLARMKEDKNINLMQIPGLNVGYLA 296

Query: 278 MNQNSNPALKDVRVRQAIVYAINNEGIVDKVMKGAATTAAQQSPVGYAGYNENLKP-RFD 336
            N    P L +V+VRQA++ A+N + I+D V +GA  TA    P    GYN+ ++   +D
Sbjct: 297 FNTEKKP-LDNVKVRQALIMAVNKKAIIDAVYQGAGQTAKNLIPPTMWGYNDAVQDYPYD 355

Query: 337 LNKAKELMKEAGYEKGFNLTMIA-PNNRYVND--EKIAQAASAMLSKIGIKVDLKTMPKA 393
             KAK L+KEAG   GF + + A P  R  N    ++A+      +KIG+K  + T    
Sbjct: 356 TEKAKALLKEAGLADGFTIDLWAMPVQRPYNPNARRMAEMVQNDWAKIGVKAKIVTYEWG 415

Query: 394 QYWPEFDKCAADMLMIGWHPDTEDSANFTEFLTMTRDSNTGKGQYNCGYYSNAEVDKLVN 453
           +Y           +M+GW  D  D  NF  F T+   +   +G  N   +     ++L+ 
Sbjct: 416 EYLKRAKAGEHQTVMMGWTGDNGDPDNF--FATLFSCAAAKEGS-NYSRWCYKPFEELIQ 472

Query: 454 AANEETDLEKRSTMLKKVEEILYNEA 479
            A  E D  KR    K+ + +++ +A
Sbjct: 473 PARAEADHNKRVEYYKQAQVMMHEQA 498