Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., dipeptide ABC transporter substrate-binding protein DppA from Escherichia coli ECRC62

 Score =  177 bits (449), Expect = 9e-49
 Identities = 147/505 (29%), Positives = 237/505 (46%), Gaps = 50/505 (9%)

Query: 7   KLALALIAAGLSFGAMAADITVAYDADPVSMDPHEQLSGGTLQLSHM-VFDPLIRFT-QK 64
           KL L+L+A  ++    A  +    +  P   +P    SG T   S + +++ L+ F    
Sbjct: 12  KLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSVPLYNRLVEFKIGT 71

Query: 65  MEFEPRLAESWQ-RVDNETMRFTLRKGVKFHSGNDF------TADDVVWTFNRLKESAD- 116
            E  P LAE W+   D +T  F LRKGVK+H   +F       ADDVV++F+R K + + 
Sbjct: 72  TEVIPGLAEKWEVSEDGKTYTFHLRKGVKWHDNKEFKPTRELNADDVVFSFDRQKNAQNP 131

Query: 117 -----------FKGIFEP--LVSLTKVDDYTIE-IKTAGTYPLIENVATYIFPMDSKFYT 162
                      F+G+  P  +  + KVDD T++ + T    P + ++A     + SK Y 
Sbjct: 132 YHKVSGGSYEYFEGMGLPELISEVKKVDDNTVQFVLTRPEAPFLADLAMDFASILSKEY- 190

Query: 163 GTTADGKNKAEIVKHGNSFASENISGTGPFTVTAREQGVKLEFQRNPNYWDKASKGNVDK 222
              AD   KA   +        N  GTGPF +   ++  ++ ++    YW   +K  +D 
Sbjct: 191 ---ADAMMKAGTPEK----LDLNPIGTGPFQLQQYQKDSRIRYKAFDGYW--GTKPQIDT 241

Query: 223 LTLAVIKEDATRVAALLSGGVDMIAPVSPNDYQRIKDAKGVDLFTMPGTRVITFQMNQNS 282
           L  ++  + + R A L      ++   +P D  R+K  K ++L  MPG  V     N   
Sbjct: 242 LVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVGYLSYNVQK 301

Query: 283 NPALKDVRVRQAIVYAINNEGIVDKVMKGAATTAAQQSPVGYAGYNENLKP-RFDLNKAK 341
            P L DV+VRQA+ YA+N + I+  V +GA  +A    P    GYN++++   +D  KAK
Sbjct: 302 KP-LDDVKVRQALTYAVNKDAIIKAVYQGAGVSAKNLIPPTMWGYNDDVQDYTYDPEKAK 360

Query: 342 ELMKEAGYEKGFNLTMIA-PNNRYVND--EKIAQAASAMLSKIGIKVDLKTMPKAQYWPE 398
            L+KEAG EKGF++ + A P  R  N    ++A+   A  +K+G++  + T      W E
Sbjct: 361 ALLKEAGLEKGFSIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVQAKIVTYE----WGE 416

Query: 399 FDKCAAD----MLMIGWHPDTEDSANFTEFLTMTRDSNTGKGQYNCGYYSNAEVDKLVNA 454
           + K A D     +M+GW  D  D  NF   L     S  G    N   +     + L+  
Sbjct: 417 YLKRAKDGEHQTVMMGWTGDNGDPDNFFATLFSCAASEQGS---NYSKWCYKPFEDLIQP 473

Query: 455 ANEETDLEKRSTMLKKVEEILYNEA 479
           A    D  KR  + K+ + +++++A
Sbjct: 474 ARATDDHNKRVELYKQAQVVMHDQA 498