Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  169 bits (428), Expect = 2e-46
 Identities = 135/507 (26%), Positives = 235/507 (46%), Gaps = 42/507 (8%)

Query: 1   MKTMKNKLALALIAAGLSFGAMAADITVAYDADPVSMDPHEQLSGGTLQLSHM-VFDPLI 59
           MK+   K +L L+A  ++ G  A  +    +  P   +P    SG T   S + +++ L+
Sbjct: 6   MKSRVLKFSLGLLALSVAAGVQAKTLVYCSEGSPEGFNPQLFTSGTTFDASSIPIYNRLV 65

Query: 60  RFTQ-KMEFEPRLAESWQ-RVDNETMRFTLRKGVKFHSGNDF------TADDVVWTFNRL 111
            F     E EP LAE W    D +T  F LRK VK+    DF       ADDV+++F R 
Sbjct: 66  EFKNGTTEIEPGLAEKWDISADGKTYTFHLRKDVKWQDNKDFKPSRTFNADDVLFSFQRQ 125

Query: 112 KESAD------------FKGIFEP--LVSLTKVDDYTIEIKTAGTYPLIENVATYIFPMD 157
            ++              F+G+  P  +  + KVDDYT+       + L    A ++  + 
Sbjct: 126 IDANHPFHKVSGGSYEYFEGMGMPDLIGKIEKVDDYTVR------FQLTRAEAPFLADLA 179

Query: 158 SKFYTGTTADGKNKAEIVKHGNSFASE-NISGTGPFTVTAREQGVKLEFQRNPNYWDKAS 216
             F +  +A+  +K  ++K G+    + +  GTGPF +   ++  ++ ++R  ++W   +
Sbjct: 180 MDFASIMSAEYGDK--MLKAGSPEKIDLDPIGTGPFQLQQYQKDSRILYKRFDSFW--GT 235

Query: 217 KGNVDKLTLAVIKEDATRVAALLSGGVDMIAPVSPNDYQRIKDAKGVDLFTMPGTRVITF 276
           K  +D+L  ++  + + R A L      ++   +P D   +K  K ++L   PG  V   
Sbjct: 236 KPGIDRLVFSITPDASVRYAKLQKDECQVMPYPNPADLTNMKQDKNIELLQKPGLNVGYL 295

Query: 277 QMNQNSNPALKDVRVRQAIVYAINNEGIVDKVMKGAATTAAQQSPVGYAGYNENLKP-RF 335
             N    P L +V++RQA+ YA+N + I++ V +GA   A    P    GYN+++K   +
Sbjct: 296 SFNVEKKP-LDNVKIRQALTYAVNKQAIIEAVYQGAGQAAKNLIPPTMWGYNDDVKDYAY 354

Query: 336 DLNKAKELMKEAGYEKGFNLTMIA-PNNRYVND--EKIAQAASAMLSKIGIKVDLKTMPK 392
           D  KAK L+KEAG E GF + + A P  R  N    ++A+   A  +K+G+K  + T   
Sbjct: 355 DPAKAKALLKEAGMENGFEIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVKAKIVTYEW 414

Query: 393 AQYWPEFDKCAADMLMIGWHPDTEDSANFTEFLTMTRDSNTGKGQYNCGYYSNAEVDKLV 452
            +Y           +++GW  D  D  N   FL      +  K   N   +     + L+
Sbjct: 415 GEYLKRAKSGEHQTVLMGWTGDNGDPDN---FLATLFSCDAAKKGSNYSKWCYKPFEDLI 471

Query: 453 NAANEETDLEKRSTMLKKVEEILYNEA 479
             A   +D  KR  + K+ + +++++A
Sbjct: 472 QPARAVSDQAKRIELYKQAQVVMHDQA 498