Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  145 bits (366), Expect = 4e-39
 Identities = 136/547 (24%), Positives = 237/547 (43%), Gaps = 69/547 (12%)

Query: 9   ALALIAAGLSFGAMAAD---ITVAYDADPVSMDPHEQLSGGTLQLSHMVFDPLIRFTQKM 65
           A+++ AA +  G   AD   +  A  ++P S+DPH+  S     L H  F+ L+      
Sbjct: 19  AVSVQAAAVPAGVQLADKQELVRANGSEPASLDPHKVESDVEGNLIHDFFEKLVSVRDDG 78

Query: 66  EFEPRLAESWQRVDNETMRFTLRKGVKFHSGNDFTADDVVWTFNRL---KESADFKGIFE 122
              P LA+ W+  DN+   F LR G+K+  G+  TADDVV+++ RL   K  + ++    
Sbjct: 79  TVMPGLADRWENKDNQVWTFHLRPGLKWSDGSPITADDVVFSWQRLADPKTLSPYQSYIG 138

Query: 123 PL-----------------VSLTKVDDYTIEIKTAGTYPLIENVATYIFPMDSKFYTGTT 165
            L                 + +  +D  T+++        ++   +Y  PM   +   T 
Sbjct: 139 SLHVLNAGDIIAGKKSPQELGIKALDKQTVQV-------TLDQPLSYFLPMVDHYVMITI 191

Query: 166 ADGKNKAEIVKHGNSFA-SENISGTGPFTVTAREQGVKLEFQRNPNYWDKASKGNVDKLT 224
                KA I K G+ +  + N  G+GPF  T      ++  +RNPNYWD A    ++K+T
Sbjct: 192 P----KAAIEKFGDKWTQTANFVGSGPFVPTEWVVNERITAKRNPNYWDNAHT-VLNKVT 246

Query: 225 LAVIKEDATRVAALLSGGVDMIAPVSPNDYQRIKDAKGVDLFTMPGTRVITFQMNQNSNP 284
              I  +   V    +G VD    +    ++ +K     ++   P      ++ N    P
Sbjct: 247 YLAIVSNTAEVNRYKAGEVDATYTMPNQLFKSLKQELPNEVKVTPYLSTYIYRFN-TQKP 305

Query: 285 ALKDVRVRQAIVYAINNEGIVDKVMKGAATTAAQQSPVGYAGYNENLKPRF-------DL 337
              D RVR+A+  A++   I DKV+      A    P G AGY  + +P +         
Sbjct: 306 PFNDSRVRRALDLALDKSVIADKVLGQGQVPAYNYVPRGMAGY-ASYQPEWAGWTQQQRN 364

Query: 338 NKAKELMKEAGYEKGFNLTMIAPNNRYVNDEKIAQAASAMLSK-IGIKVDL-----KTMP 391
            +AK+L+KEAGY++   L      N   + +KIA AA++M  + +G +  L     KT+ 
Sbjct: 365 AEAKKLLKEAGYDESHPLKFQLLYNTSESHQKIAIAAASMWKQNLGAEATLLNQEWKTLL 424

Query: 392 KAQYWPEFDKCAADMLMIGWHPDTEDSANFTEFLTMTRDSNTGKGQYNCGYYSNAEVDKL 451
                  F     +++   W  D  + + + + L     +NTGK       +++   D++
Sbjct: 425 DTSRTGNF-----EVVRNSWGADYNEPSTYFDTLRANDSNNTGK-------FNDKAYDEV 472

Query: 452 VNAANEETDLEKRSTMLKKVEEILYNEAAFVPLHFQDPSWAAKNTLDIAPIINGMDFPYF 511
           ++ A + + L+ RS +  + E IL  +   +P+++   S   K      P + G      
Sbjct: 473 LDKAVKASSLDDRSALYHQAEAILQQQMPLIPIYYYVRSQMVK------PYMGGFKPDLK 526

Query: 512 GDLVVKE 518
           GD   K+
Sbjct: 527 GDYYSKD 533