Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 530 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  149 bits (377), Expect = 2e-40
 Identities = 136/543 (25%), Positives = 234/543 (43%), Gaps = 54/543 (9%)

Query: 1   MKTMKNKLALALIAAGLSFGAMAADITVAYDADPVSMDPHEQLSGGTLQLSHM-VFDPLI 59
           MK    ++ALA +    +  A A  +    +  P + +P    SG ++  S + +++ L+
Sbjct: 1   MKNAITRVALAALTLAAAQAACANTLVYCSEGSPENFNPQLYTSGTSVDASAVPIYNRLV 60

Query: 60  RF-TQKMEFEPRLAESWQ-RVDNETMRFTLRKGVKFHSG------NDFTADDVVWTFNRL 111
            F     E  P LAE W    D     F LRKGVKFH         DF ADDV+++F R 
Sbjct: 61  DFKVGTTELVPSLAERWDISPDGTQYTFHLRKGVKFHRNAQFTPSRDFNADDVIFSFQRQ 120

Query: 112 KES------------ADFKGI-FEPLVS-LTKVDDYTIEIKTAGTYPLIENVATYIFPMD 157
           ++             A+F+ + F  L++ + +VDDY +    +         A   F  D
Sbjct: 121 RDLNHPYHKVSGGTYANFESLSFRSLITAIDRVDDYRVRFTLSH--------AEAPFLAD 172

Query: 158 SKFYTGTTADGKNKAEIVKHGNSFASENIS----GTGPFTVTAREQGVKLEFQRNPNYWD 213
             +Y  +    +   +++K G   A E +     GTGPF +   ++  ++ +Q  P+YW 
Sbjct: 173 LAWYFASVLSAEYADQMLKAG---APEKVDLEPIGTGPFQLAQYQKDSRILYQAFPDYWQ 229

Query: 214 KASKGNVDKLTLAVIKEDATRVAALLSGGVDMIAPVSPNDYQRIKDAKGVDLFTMPGTRV 273
              K  +D+L  ++  + + R A L      ++   +P +   IK  K + L    G  +
Sbjct: 230 --GKAKLDRLVFSITPDASVRYAKLRKNECQVMPFPNPAELADIKSNKDITLMQKAGLNI 287

Query: 274 ITFQMNQNSNPALKDVRVRQAIVYAINNEGIVDKVMKGAATTAAQQSPVGYAGYNENLKP 333
                N    P L +++VRQA+  AIN   I++ V +G  + A    P G      +LK 
Sbjct: 288 GFLAFNTRKAP-LDNLKVRQALTMAINKPAIIEAVFQGTGSAAKNLLPPGVWSAAADLKD 346

Query: 334 -RFDLNKAKELMKEAGYEKGFNLTMIA-PNNRYVND--EKIAQAASAMLSKIGIKVDLKT 389
             +D  KA+ L+K+AG  +G  + + A P  R  N    ++A+   A  +K+G+  ++ +
Sbjct: 347 YEYDPGKARALLKDAGLAEGTTIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVNANIVS 406

Query: 390 MPKAQYWPEFDKCAADMLMIGWHPDTEDSANFTEFLTMTRDSNTGKGQYNCGYYSNAEVD 449
               +Y            ++GW   T D  NF   L     +N G    N   +     D
Sbjct: 407 YEWGEYLKRVRSGEHQAALMGWTTATGDPDNFFGPLFTCTSANGGS---NSSKWCYPPFD 463

Query: 450 KLVNAANEETDLEKRSTMLKKVEEILYNEAAFVPLHFQDPSWAAKNTLDIAPIINGMDFP 509
           KL+  A  E D +KR  + ++ + +++ +A  V +         +NT      + G D  
Sbjct: 464 KLITDARAEQDHQKRVELYRQAQFMMHEQAPAVMIAHSTLFEPVRNT------VTGYDID 517

Query: 510 YFG 512
            FG
Sbjct: 518 PFG 520