Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., ABC transporter substrate-binding protein from Dickeya dadantii 3937

 Score =  155 bits (392), Expect = 3e-42
 Identities = 135/526 (25%), Positives = 234/526 (44%), Gaps = 44/526 (8%)

Query: 1   MKTMKNKLALALIAAGLSFGAMAADITVAYDADPVSMDPHEQLSGGTLQLSHM-VFDPLI 59
           MK    ++ALA +    +  A A  +    +  P + +P    SG ++  S + +++ L+
Sbjct: 1   MKNAITRVALAALTLAAAQAACAKTLVYCSEGSPENFNPQLYTSGTSVDASAVPIYNRLV 60

Query: 60  RF-TQKMEFEPRLAESWQ-RVDNETMRFTLRKGVKFHSG------NDFTADDVVWTFNRL 111
            F     E  P LAESW    D     F LRKGVKFH         DF ADDV+++F R 
Sbjct: 61  DFKVGTTELAPSLAESWDISPDGTQYTFHLRKGVKFHRNAQFTPSRDFNADDVIFSFQRQ 120

Query: 112 KES------------ADFKGI-FEPLVS-LTKVDDYTIEIKTA-GTYPLIENVATYIFPM 156
           ++             A+F+ + F  L++ + K+DDYT+    +    P + ++A Y   +
Sbjct: 121 RDPNHPYHKVSGGTYANFESLSFRSLITAIDKLDDYTVRFTLSHAEAPFLADLAWYFASI 180

Query: 157 DSKFYTGTTADGKNKAEIVKHGNSFASE-NISGTGPFTVTAREQGVKLEFQRNPNYWDKA 215
            S  Y           +++K G     +    GTGPF +   ++  ++ +Q  PNYW   
Sbjct: 181 LSAEYAD---------QMLKAGTPEKVDLEPIGTGPFQLAQYQKDSRILYQAFPNYWQ-- 229

Query: 216 SKGNVDKLTLAVIKEDATRVAALLSGGVDMIAPVSPNDYQRIKDAKGVDLFTMPGTRVIT 275
            K  +D+L  ++  + + R A L      ++   +P +   +K+ K + L    G  +  
Sbjct: 230 GKAKLDRLVFSITPDASVRYAKLRKNECQVMPFPNPAELADMKNNKDITLMQKAGLNIGF 289

Query: 276 FQMNQNSNPALKDVRVRQAIVYAINNEGIVDKVMKGAATTAAQQSPVGYAGYNENLKP-R 334
              N    P L +V+VRQA+  AIN   I++ V +G  + A    P G      +LK   
Sbjct: 290 LAFNTRKAP-LDNVKVRQALTMAINKPAIIEAVFQGTGSAAKNLLPPGVWSAAADLKDYE 348

Query: 335 FDLNKAKELMKEAGYEKGFNLTMIA-PNNRYVND--EKIAQAASAMLSKIGIKVDLKTMP 391
           +D  KA+ L+K+AG  +G  + + A P  R  N    ++A+   A  +K+G+K ++ +  
Sbjct: 349 YDPEKARALLKDAGLAEGTAIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVKANIVSYE 408

Query: 392 KAQYWPEFDKCAADMLMIGWHPDTEDSANFTEFLTMTRDSNTGKGQYNCGYYSNAEVDKL 451
             +Y            ++GW   T D  NF   L     +N G    N   +     DKL
Sbjct: 409 WGEYLKRVRSGEHQAALMGWTTATGDPDNFFGPLFTCTSANGGS---NSAKWCYPPFDKL 465

Query: 452 VNAANEETDLEKRSTMLKKVEEILYNEAAFVPLHFQDPSWAAKNTL 497
           +  A  E D +KR  + ++ + +++ +A  V +         +NT+
Sbjct: 466 ITDARAEQDHQKRVELYRQAQFMMHEQAPAVMIAHSTIFEPVRNTV 511