Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., ABC transporter substrate-binding protein from Dickeya dadantii 3937

 Score =  264 bits (675), Expect = 5e-75
 Identities = 173/509 (33%), Positives = 259/509 (50%), Gaps = 35/509 (6%)

Query: 21  AMAADITVAYDADPVSMDPHEQLSGGTLQLSHMVFDPLIRFTQKMEFEPRLAESWQRVDN 80
           A AAD+T+   +   SMDP   + G    ++  +FD L+   +K +  P LA SW+ V++
Sbjct: 17  AQAADLTIGLASSTTSMDPQFYVGGANSAMARNLFDGLVNQNEKQQITPALAVSWKAVND 76

Query: 81  ETMRFTLRKGVKFHSGNDFTADDVVWTFNRLKESA-DFKGIFEPLVS----LTKVDDYTI 135
            T +FTLR  VKFH G DF+A DVV +  R+  +A +    + P V+    + ++D  T+
Sbjct: 77  TTWQFTLRPNVKFHDGTDFSARDVVASVKRVALAAKNSPSAYTPYVADIGEIREIDPLTV 136

Query: 136 EIKTAGTYPLIENVATYIFPMDSKFYTGTTADGKNKAEIVKHGNSFASENISGTGPFTVT 195
           EIKT G   L+ N  + I  + ++     T       +++  G     +++ GTGPF   
Sbjct: 137 EIKTKGPAALLLNNLSRIAILPARLADQPT-------DVLNGG-----KDVIGTGPFKFV 184

Query: 196 AREQGVKLEFQRNPNYWDKASKGNVDKLTLAVIKEDATRVAALLSGGVDMIAPVSPNDYQ 255
           +     K+   RN +YW    K   D +TL VIK  + R+AALLSG VDMI  V   D  
Sbjct: 185 SYTPDDKVVLSRNDHYW--GGKAEWDTVTLRVIKNSSARIAALLSGDVDMIESVPTADRA 242

Query: 256 RIKDAKGVDLFTMPGTRVITFQMNQN------------SNPALKDVRVRQAIVYAINNEG 303
            I   +     ++PG R++    +Q+             NP LK   VRQA+  AIN + 
Sbjct: 243 TIARQQAFATESVPGNRILYLHPDQDRDVSPFAKGDDGKNP-LKKAEVRQAMSLAINRDA 301

Query: 304 IVDKVMKGAATTAAQQSPVGYAGYNENL-KPRFDLNKAKELMKEAGYEKGFNLTMIAPNN 362
           +V +++ G    ++Q  P GY GY+  +  P +DL +AK+ +  AGY  GF LT  A N+
Sbjct: 302 LVQRILDGQGLPSSQLVPQGYPGYSAKIPAPVYDLAQAKQKLAAAGYPNGFTLTFHASND 361

Query: 363 RYVNDEKIAQAASAMLSKIGIKVDLKTMPKAQYWPEFDKCAADMLMIGWHPDTEDSANFT 422
           RY ND KIAQA   M S+ GIK ++ TMP   Y+ +  +    ++M G   +T +++   
Sbjct: 362 RYPNDAKIAQALGQMFSQAGIKTEVVTMPGNVYFAKAAQREFSLVMGGAAIETGEASGVL 421

Query: 423 EFLTMTRDSNTGKGQYNCGYYSNAEVDKLVNAANEETDLEKRSTMLKKVEEILYNEAAFV 482
             L  T   N G+G  N G YSNAE DKL+N A    D  +R  +L++  E+   E   +
Sbjct: 422 GPLLETFGPNAGQG--NRGRYSNAEFDKLLNQARATLDERQRDALLQQATELAMKEQGVI 479

Query: 483 PLHFQDPSWAAKNTLDIAPIINGMDFPYF 511
           PL F   +WA K         +G   PYF
Sbjct: 480 PLLFLSNTWAMKKGYSYVGRTDGYTLPYF 508