Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., ABC transporter substrate-binding protein from Dickeya dadantii 3937

 Score =  137 bits (345), Expect = 9e-37
 Identities = 115/405 (28%), Positives = 198/405 (48%), Gaps = 52/405 (12%)

Query: 8   LALALIAAGLSF---GAMAADITVAYDADPVSMDP-HEQLSGGTLQLSHMVFDPLI-RFT 62
           L +AL+  G ++   G     +  A D++  ++ P H  +  G + L+H+ +D LI R  
Sbjct: 13  LLMALLLGGTTYSYAGKQNDTLVYASDSEVENVSPYHNNMREGVI-LAHLAWDTLIYRDP 71

Query: 63  QKMEFEPRLAESWQRVDNETMRFTLRKGVKFHSGNDFTADDVVWTFNRL---KESADFKG 119
           +  E++  LA  W+      +   LRKGV FH+G+ F+ADDVV+TF  +     ++    
Sbjct: 72  KTGEYKGELATDWKWESPVVLLLHLRKGVTFHNGDSFSADDVVYTFQSIAGPNTASVIPQ 131

Query: 120 IFEPLVSLTKVDDYTIEIKTAGTYP-LIENVA--TYIFPMDSKFYTGTTADGKNKAEIVK 176
             + +    KVDDYT+ +     +P  +E ++  T I+P  +K++     +G +KA +  
Sbjct: 132 SVDWIDHAEKVDDYTVRLHLKKPFPAALEYLSGPTPIYP--AKYFQQVKLEGFSKAPV-- 187

Query: 177 HGNSFASENISGTGPFTVTAREQGVKLEFQRNPNYWDKASKG--NVDKLTLAVIKEDATR 234
                      GTGP+ +     G  +   +NP+Y+  +  G   + KL   VI++   R
Sbjct: 188 -----------GTGPYKIVKVTPGQGVSMVKNPDYFKDSPIGQPKIGKLQFVVIRDPEAR 236

Query: 235 VAALLSGGVDMIAPVSPNDYQRIKDAKGVDLFTMPGTRVITFQMNQNSN----PALKDVR 290
           VA L++G VD I  V+ +    +     + + +    RV   ++N N++       KD+R
Sbjct: 237 VAQLMTGQVDWIWRVASDQVDSLSAMPNIAVKSGETMRVGFLELNTNASGPEGAPFKDLR 296

Query: 291 VRQAIVYAINNEGIVDKVMKGAATTAAQQSPVGYAGY--------NENLKPRFDLNKAKE 342
           VRQAI YAIN + +VD +++G +       PV  A +        ++ ++  +D  KAK+
Sbjct: 297 VRQAINYAINRQAMVDNLVRGGS------KPVYSACFRTQTACDASQVIQYPYDPAKAKQ 350

Query: 343 LMKEAGYEKGFNLTMIAPNNRYVNDEKIAQAASAMLSKIGIKVDL 387
           L+ EAGY  GF+  + A   R       A+A    L K+GI+  L
Sbjct: 351 LLAEAGYANGFDTDLWAYRER-----DYAEAIIGDLRKVGIRARL 390